Gene: CALSI_Maker00011202 (Calamus simplicifolius)

Overview top

Gene Identifier
CALSI_Maker00011202
Transcript Identifier
CALSI_Maker00011202
Gene Type
Coding gene
Location
scaffold1559 : 43631-77875 : positive

Family Information

Homologous gene family
HOM04x5M001688
(140 genes in 35 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidMaker00011202

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT2G40030
GO:0035194
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing by RNA AT2G40030
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT2G40030
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT2G40030

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G40030

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G40030
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT2G40030
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT2G40030
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G40030

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007080RNA polymerase Rpb1, domain 1

Mapman id Description
35.1not assigned.annotated