Gene: Bradi2g53090 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi2g53090
Transcript Identifier
Bradi2g53090.1
Gene Type
Coding gene
Location
Bd2 : 52089274-52092267 : negative

Family Information

Homologous gene family
HOM04x5M005130
(58 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M006265
(57 genes in 39 species)
specific family

Descriptions

Description
mRNA 3'-UTR binding (Blast2GO)

Identifiers

Type Value
idBradi2g53090.v3.1
pacid32773765
tidBradi2g53090.1.v3.1
tidBradi2g53090.1
ancestorIdentifierBradi2g53090.v2.1
ancestorIdentifierBradi2g53090.1.v2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT5G04920
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G04920
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT5G04920
GO:0071985
ISO
PLAZA Integrative Orthologymultivesicular body sorting pathway AT5G04920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IEA
InterProubiquitin binding
GO:0032266
IEA
InterProphosphatidylinositol-3-phosphate binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000814
IEA
InterProESCRT II complex
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT5G04920
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G04920
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G04920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR036388Winged helix-like DNA-binding domain superfamily
IPR037855Vacuolar protein sorting protein 36
IPR040608Snf8/Vps36 family
IPR021648Vacuolar protein sorting protein 36, GLUE domain
IPR036390Winged helix DNA-binding domain superfamily

Mapman id Description
22.5.4.2.3Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-II complex.component VPS36