Gene: Bradi1g08560 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi1g08560
Transcript Identifier
Bradi1g08560.4
Gene Type
Coding gene
Location
Bd1 : 6042600-6045833 : negative

Family Information

Homologous gene family
HOM04x5M000532
(360 genes in 37 species)
specific family
Orthologous gene family
ORTHO04x5M000465
(316 genes in 37 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Glycosyl hydrolase (GH), subfamily GH3

Identifiers

Type Value
aliasBdGH3_2
idBradi1g08560.v3.1
pacid32806769
tidBradi1g08560.4.v3.1
tidBradi1g08560.4
ancestorIdentifierBradi1g08560.v2.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0009969
ISO
PLAZA Integrative Orthologyxyloglucan biosynthetic process AT5G04885

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009044
ISO
PLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activity AT3G62710
GO:0008422
ISO
PLAZA Integrative Orthologybeta-glucosidase activity AT5G04885

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G20950
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G20950
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT5G20950
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G20950
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT5G20950
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G04885
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT5G04885

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR036962Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR036881Glycoside hydrolase family 3 C-terminal domain superfamily
IPR001764Glycoside hydrolase, family 3, N-terminal
IPR002772Glycoside hydrolase family 3 C-terminal domain
IPR017853Glycoside hydrolase superfamily

Mapman id Description
50.3.2Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase