Gene: Aco009946 (Ananas comosus)

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Gene Identifier
Aco009946
Transcript Identifier
Aco009946.1
Gene Type
Coding gene
Location
LG10 : 1648808-1650079 : positive

Family Information

Homologous gene family
HOM04x5M000355
(495 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M000678
(246 genes in 38 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Zinc finger CCCH domain-containing protein

Identifiers

Type Value
idAco009946.v3
pacid33046666
tidAco009946.1.v3
tidAco009946.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G25900
GO:0061157
ISO
PLAZA Integrative OrthologymRNA destabilization AT2G25900
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT2G19810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT2G25900
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT2G25900
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G25900

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G29190
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G25900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000571Zinc finger, CCCH-type

Mapman id Description
16.9.2RNA processing.mRNA sequestration.mRNA-binding regulatory factor (TZF)