Gene: Aco008740 (Ananas comosus)

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Gene Identifier
Aco008740
Transcript Identifier
Aco008740.1
Gene Type
Coding gene
Location
LG09 : 1964473-1973724 : positive

Family Information

Homologous gene family
HOM04x5M000423
(437 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M005888
(59 genes in 39 species)
specific family

Descriptions

Description
Cullin-4

Identifiers

Type Value
idAco008740.v3
pacid33034135
tidAco008740.1.v3
tidAco008740.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT5G46210
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development AT5G46210
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT5G46210
GO:0000209
ISO
PLAZA Integrative Orthologyprotein polyubiquitination AT5G46210
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT5G46210
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT5G46210
GO:0009755
ISO
PLAZA Integrative Orthologyhormone-mediated signaling pathway AT5G46210
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT5G46210
GO:0048367
ISO
PLAZA Integrative Orthologyshoot system development AT5G46210
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT5G46210
GO:0048575
ISO
PLAZA Integrative Orthologyshort-day photoperiodism, flowering AT5G46210
GO:0010100
ISO
PLAZA Integrative Orthologynegative regulation of photomorphogenesis AT5G46210

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IEA
InterProubiquitin protein ligase binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G46210

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031461
IEA
InterProcullin-RING ubiquitin ligase complex
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT5G46210
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G46210
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT5G46210
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G46210

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR036388Winged helix-like DNA-binding domain superfamily
IPR033044Cullin-4B
IPR001373Cullin, N-terminal
IPR019559Cullin protein, neddylation domain
IPR016157Cullin, conserved site
IPR016158Cullin homology domain
IPR036390Winged helix DNA-binding domain superfamily
IPR016159Cullin repeat-like-containing domain superfamily
IPR036317Cullin homology domain superfamily

Mapman id Description
19.2.2.8.3.1Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.scaffold component CUL4
26.1.1.3.1External stimuli response.light.red/far red light.CUL4-DDB1 ubiquitination complex.scaffold component (CUL4)