Gene: Aco005922 (Ananas comosus)

Overview top

Gene Identifier
Aco005922
Transcript Identifier
Aco005922.1
Gene Type
Coding gene
Location
LG16 : 10399431-10405130 : negative

Family Information

Homologous gene family
HOM04x5M001086
(203 genes in 39 species)
specific family

Descriptions

Description
telomere repeat binding factor 1

Identifiers

Type Value
idAco005922.v3
pacid33034455
tidAco005922.1.v3
tidAco005922.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G49950
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT1G49950
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G49950
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT1G49950
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT1G49950
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G49950
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G49950
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin AT1G49950
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G49950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G49950
GO:0003691
ISO
PLAZA Integrative Orthologydouble-stranded telomeric DNA binding AT1G49950
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G49950
GO:0043047
ISO
PLAZA Integrative Orthologysingle-stranded telomeric DNA binding AT3G49850
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G49950
GO:0070491
ISO
PLAZA Integrative Orthologyrepressing transcription factor binding AT1G49950
GO:1990841
ISO
PLAZA Integrative Orthologypromoter-specific chromatin binding AT1G49950
GO:0042162
ISO
PLAZA Integrative Orthologytelomeric DNA binding AT5G67580
GO:0033613
ISO
PLAZA Integrative Orthologyactivating transcription factor binding AT1G49950

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0005634
IEA
InterPronucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G49950
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT1G49950
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT1G49950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR005818Linker histone H1/H5, domain H15
IPR009057Homeobox-like domain superfamily
IPR036390Winged helix DNA-binding domain superfamily

Mapman id Description
12.3.3.1.2.1Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.PRC2-recruiting factor (TRB)
15.5.2.2RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)