Gene: ATR1132G011 (Amborella trichopoda)

Overview top

Gene Identifier
ATR1132G011
Transcript Identifier
ATR1132G011.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00072 : 2694195-2750679 : positive

Family Information

Homologous gene family
HOM04x5M003865
(70 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M004528
(70 genes in 39 species)
specific family
Duplication type
Tandem duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00072.117
idevm_27.TU.AmTr_v1.0_scaffold00072.117.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00072.117
nameevm_27.model.AmTr_v1.0_scaffold00072.117
pacid31572541
tidevm_27.model.AmTr_v1.0_scaffold00072.117.v1.0

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000938
IEA
InterProGARP complex
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G19490

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR039745Vacuolar protein sorting-associated protein 54
IPR012501Vacuolar protein sorting-associated protein 54, C-terminal

Mapman id Description
22.6.1.4Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.GARP-specific component VPS54