Gene: ATR0665G139 (Amborella trichopoda)

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Gene Identifier
ATR0665G139
Transcript Identifier
ATR0665G139.1
Gene Type
Coding gene
Location
AmTr_v1.0_scaffold00002 : 7447742-7449061 : positive

Family Information

Homologous gene family
HOM04x5M000482
(396 genes in 37 species)
specific family
Orthologous gene family
ORTHO04x5M000362
(384 genes in 37 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
geneNameEVM prediction AmTr_v1.0_scaffold00002.433
idevm_27.TU.AmTr_v1.0_scaffold00002.433.v1.0
nameevm_27.TU.AmTr_v1.0_scaffold00002.433
nameevm_27.model.AmTr_v1.0_scaffold00002.433
pacid31562504
tidevm_27.model.AmTr_v1.0_scaffold00002.433.v1.0

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010411
ISO
PLAZA Integrative Orthologyxyloglucan metabolic process AT4G02500
GO:0048767
ISO
PLAZA Integrative Orthologyroot hair elongation AT4G02500
GO:0000271
ISO
PLAZA Integrative Orthologypolysaccharide biosynthetic process AT4G02500
GO:0009969
ISO
PLAZA Integrative Orthologyxyloglucan biosynthetic process AT4G02500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016757
IEA
InterProtransferase activity, transferring glycosyl groups
GO:0033843
ISO
PLAZA Integrative Orthologyxyloglucan 6-xylosyltransferase activity AT4G02500
GO:0035252
ISO
PLAZA Integrative OrthologyUDP-xylosyltransferase activity AT4G02500
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G02500
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G02500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G02500
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT4G02500
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT4G02500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR029044Nucleotide-diphospho-sugar transferases
IPR008630Glycosyltransferase 34

Mapman id Description
21.2.1.1.2Cell wall organisation.hemicellulose.xyloglucan.biosynthesis.UDP-xylose-dependent 1,6-alpha-xylosyltransferase