Gene: AT5G64960 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G64960
Transcript Identifier
AT5G64960.1
Gene Type
Coding gene
Location
Chr5 : 25955497-25958427 : positive

Family Information

Homologous gene family
HOM04x5M000044
(2164 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M002013
(124 genes in 39 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
cyclin dependent kinase group C2
Curated Summary
Encodes CDKC;2, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. Co-localizes with spliceosomal components in a manner dependent on the transcriptional status of the cells and on CDKC2-kinase activity. Expression of CDKC2 modifies the location of spliceosomal components.
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Identifiers

Type Value
AliasCDKC;2,Cyclin-dependent kinase C;2
DbxrefPMID:15686519,PMID:17468259,PMID:18433157,gene:2177743,UniProt:Q8W4P1
symbolCDKC2
tidAT5G64960.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
Gene Ontologyprotein phosphorylation1
GO:0006468
IEA
InterProprotein phosphorylation
GO:0009615
IEP
Gene Ontologyresponse to virus2 3
GO:0009908
IMP
Gene Ontologyflower development2 3
GO:0048366
IGI
Gene Ontologyleaf development2 3
GO:0048440
IGI
Gene Ontologycarpel development2 3
GO:0050792
IMP
Gene Ontologyregulation of viral process2 3
GO:0006397
IMP, IEP
Gene OntologymRNA processing4 5
GO:0009414
IMP
Gene Ontologyresponse to water deprivation6 7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
IEA
Gene Ontologyprotein kinase activity1
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
Gene OntologyATP binding8
GO:0005524
IEA
InterProATP binding
GO:0016301
IDA
ISS
Gene Ontologykinase activity2 3 9
GO:0005515
IPI
Gene Ontologyprotein binding10 11

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
Gene Ontologynucleus12 13 14
GO:0016604
IDA
Gene Ontologynuclear body4 5
GO:0005829
IDA
Gene Ontologycytosol15 16

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000719Protein kinase domain
IPR017441Protein kinase, ATP binding site
IPR008271Serine/threonine-protein kinase, active site
IPR011009Protein kinase-like domain superfamily

Mapman id Description
13.1.1.2.3Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase complex.catalytic component CDKC
15.3.2.1.1RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.CTDK-I protein kinase complex.catalytic component CDKC-1/CTK1
18.4.3.1.3Protein modification.phosphorylation.CMGC protein kinase superfamily.CDK protein kinase families.protein kinase (CDKC)