Gene: AT5G62540 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G62540
Transcript Identifier
AT5G62540.1
Gene Type
Coding gene
Location
Chr5 : 25104679-25105465 : positive

Family Information

Homologous gene family
HOM04x5M000065
(1800 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M001399
(152 genes in 39 species)
specific family

Descriptions

Description
ubiquitin-conjugating enzyme 3
Curated Summary
Encodes a protein predicted to be an E2 ubiquitin conjugating enzyme. It appears homologous to the RAD6 protein in yeast implicated in histone ubiquitination, but, UBC3 has not been experimentally associated with this process.
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Identifiers

Type Value
DbxrefPMID:11019805,gene:2154103,UniProt:P42746
symbolUBC3
tidAT5G62540.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IDA
TAS
Gene Ontologyubiquitin-dependent protein catabolic process1 2 3 4
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process5
GO:0006281
IBA
Gene OntologyDNA repair5
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IDA
ISS
Gene Ontologyubiquitin-protein transferase activity3 4 6
GO:0005524
IEA
Gene OntologyATP binding7
GO:0061631
IBA
Gene Ontologyubiquitin conjugating enzyme activity5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000608Ubiquitin-conjugating enzyme E2
IPR016135Ubiquitin-conjugating enzyme/RWD-like
IPR023313Ubiquitin-conjugating enzyme, active site

Mapman id Description
19.2.2.1.4Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)