Gene: AT5G52310 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G52310
Transcript Identifier
AT5G52310.1
Gene Type
Coding gene
Location
Chr5 : 21240929-21243326 : positive

Family Information

Homologous gene family
HOM04x5M010961
(10 genes in 5 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A)
Curated Summary
cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression
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Identifiers

Type Value
AliasCOR78,COLD REGULATED 78,LTI140,RD29A,RESPONSIVE TO DESSICATION 29A
full_nameLOW-TEMPERATURE-INDUCED 78
DbxrefPMID:9418048,PMID:11351099,PMID:15276459,PMID:15654638,PMID:16258011,PMID:16463099,PMID:16513815,PMID:16614820,PMID:16730809,PMID:16766676,PMID:16913865,PMID:17001447,PMID:17031511,PMID:17227550,PMID:17318317,PMID:17332757,PMID:17453213,PMID:17533512,PMID:17483953,PMID:17556511,PMID:17653723,PMID:17628825,PMID:18356294,PMID:18643991,PMID:18612099,PMID:18680727,gene:2156661,UniProt:Q06738
symbolLTI78
tidAT5G52310.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009737
IEP
Gene Ontologyresponse to abscisic acid1 2
GO:0009737
IEA
InterProresponse to abscisic acid
GO:0009269
IMP
Gene Ontologyresponse to desiccation3
GO:0006970
IGI
Gene Ontologyresponse to osmotic stress4 5
GO:0009409
IEP
Gene Ontologyresponse to cold1 2
GO:0009414
IEP
Gene Ontologyresponse to water deprivation1 2
GO:0009651
IEP
Gene Ontologyresponse to salt stress1 2
GO:0007623
IEP
Gene Ontologycircadian rhythm6 7
GO:2000280
IDA
Gene Ontologyregulation of root development8 9
GO:0010150
IMP
Gene Ontologyleaf senescence10 11
GO:0000302
IEP
Gene Ontologyresponse to reactive oxygen species12 13
GO:1902074
IEP
Gene Ontologyresponse to salt12 13
GO:0009611
IEP
Gene Ontologyresponse to wounding14 15
GO:0009609
IEP
Gene Ontologyresponse to symbiotic bacterium16 17
GO:0042538
IEP
Gene Ontologyhyperosmotic salinity response18 19
GO:0010555
IEP
Gene Ontologyresponse to mannitol20 21
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT5G52300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function22

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus23
GO:0005737
IDA
Gene Ontologycytoplasm24 25
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G25580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR037491Low-temperature-induced 78kDa/65kDa

Mapman id Description
35.1not assigned.annotated