Gene: AT5G45600 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G45600
Transcript Identifier
AT5G45600.1
Gene Type
Coding gene
Location
Chr5 : 18488059-18489666 : positive

Family Information

Homologous gene family
HOM04x5M005821
(53 genes in 36 species)
specific family
Orthologous gene family
ORTHO04x5M007372
(52 genes in 36 species)
specific family

Descriptions

Description
YEATS family protein
Curated Summary
The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. It negatively regulates flowering by controlling the H4 acetylation levels in the FLC and FT chromatin.
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Identifiers

Type Value
AliasTAF14B,TBP-ASSOCIATED FACTOR 14B,YAF9a,homolog of yeast YAF9 a
full_nameGLIOMAS 41
DbxrefPMID:10913114,gene:2157155,UniProt:Q9FH40
symbolGAS41
tidAT5G45600.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISS
IEA
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0006281
IEA
Gene OntologyDNA repair3
GO:0009908
IEA
Gene Ontologyflower development3
GO:0030154
IEA
Gene Ontologycell differentiation3
GO:0048510
IMP
Gene Ontologyregulation of timing of transition from vegetative to reproductive phase4 5
GO:0090239
IMP
Gene Ontologyregulation of histone H4 acetylation4 5
GO:0043981
IGI
Gene Ontologyhistone H4-K5 acetylation6 7
GO:2000028
IGI
Gene Ontologyregulation of photoperiodism, flowering6 7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding6 7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
Gene Ontologycytoplasm8
GO:0009507
ISM
Gene Ontologychloroplast9
GO:0005634
IPI
ISS
Gene Ontologynucleus6 7 10 11

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Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR038704YEATS superfamily
IPR005033YEATS

Mapman id Description
12.4.6.2Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared subcomplex.component YAF9
15.3.5.3.14RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIId basal transcription regulation complex.component TAF14