Gene: AT5G20850 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G20850
Transcript Identifier
AT5G20850.1
Gene Type
Coding gene
Location
Chr5 : 7070758-7072860 : negative

Family Information

Homologous gene family
HOM04x5M001278
(176 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M001342
(156 genes in 39 species)
specific family

Descriptions

Description
RAS associated with diabetes protein 51
Curated Summary
Encodes a homolog of yeast RAD51. Its mRNA is most abundant in early flower buds and is expressed at high levels in exponentially growing cells in suspension cultures and is induced in response to gamma radiation. Also involved in defense gene transcription during plant immune responses.
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Identifiers

Type Value
AliasATRAD51
DbxrefPMID:17227544,gene:2147091,UniProt:P94102
symbolRAD51
tidAT5G20850.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006259
IDA
TAS
Gene OntologyDNA metabolic process1 2 3 4
GO:0006259
IEA
InterProDNA metabolic process
GO:0006281
ISS
Gene OntologyDNA repair5
GO:0006281
IEA
InterProDNA repair
GO:0000724
IEA
Gene Ontologydouble-strand break repair via homologous recombination6
GO:0000724
IEA
InterProdouble-strand break repair via homologous recombination
GO:1990426
IEA
Gene Ontologymitotic recombination-dependent replication fork processing6
GO:1990426
IEA
InterPromitotic recombination-dependent replication fork processing
GO:0010332
IEP
Gene Ontologyresponse to gamma radiation7 8
GO:0006302
IMP
Gene Ontologydouble-strand break repair9 10
GO:0006355
IDA
Gene Ontologyregulation of transcription, DNA-templated11 12
GO:0045003
IDA
Gene Ontologydouble-strand break repair via synthesis-dependent strand annealing13 14
GO:0009314
NAS
Gene Ontologyresponse to radiation1 2
GO:0042148
IBA
Gene Ontologystrand invasion15
GO:0006312
IBA
Gene Ontologymitotic recombination15
GO:0007131
IBA
Gene Ontologyreciprocal meiotic recombination15
GO:0000730
IBA
Gene OntologyDNA recombinase assembly15
GO:0070192
IBA
Gene Ontologychromosome organization involved in meiotic cell cycle15

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
Gene OntologyATP binding16
GO:0005524
IEA
InterProATP binding
GO:0008094
IBA
IEA
Gene OntologyDNA-dependent ATPase activity6 15
GO:0008094
IEA
InterProDNA-dependent ATPase activity
GO:0000166
IEA
InterPronucleotide binding
GO:0000150
IBA
IEA
Gene Ontologyrecombinase activity6 15
GO:0000150
IEA
InterProrecombinase activity
GO:0003690
IBA
IEA
Gene Ontologydouble-stranded DNA binding6 15
GO:0003690
IEA
InterProdouble-stranded DNA binding
GO:0003697
IBA
IEA
Gene Ontologysingle-stranded DNA binding6 15
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0003684
ISS
Gene Ontologydamaged DNA binding5
GO:0005515
IPI
Gene Ontologyprotein binding17 18

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
IEA
Gene Ontologynucleus19 20 21 22
GO:0005694
IDA
Gene Ontologychromosome23 24
GO:0000794
IBA
Gene Ontologycondensed nuclear chromosome15

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033925Rad51/DMC1/RadA
IPR013632DNA recombination and repair protein Rad51-like, C-terminal
IPR016467DNA recombination and repair protein, RecA-like
IPR020587DNA recombination and repair protein RecA, monomer-monomer interface
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domain
IPR003593AAA+ ATPase domain
IPR003583Helix-hairpin-helix DNA-binding motif, class 1
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helical
IPR011941DNA recombination/repair protein Rad51

Mapman id Description
14.3.2.4DNA damage response.homologous recombination repair (HR).BRCC DNA-damage response complex.component RAD51