Gene: AT4G36890 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT4G36890
Transcript Identifier
AT4G36890.1
Gene Type
Coding gene
Location
Chr4 : 17379631-17381627 : negative

Family Information

Homologous gene family
HOM04x5M002110
(118 genes in 37 species)
specific family
Orthologous gene family
ORTHO04x5M004068
(76 genes in 37 species)
specific family

Descriptions

Description
Nucleotide-diphospho-sugar transferases superfamily protein
Curated Summary
The IRX14 gene encodes a putative family 43 glycosyl transferase that contributes to xylan biosynthesis. It was identified based on its gene expression co-variance with the IRX3 gene involved in secondary cell wall synthesis. A biochemical assay using the irx14 mutant indicates that IRX14 might function in xylose chain elongation.
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Identifiers

Type Value
full_nameirregular xylem 14
Dbxrefgene:2115089,UniProt:Q8L707
symbolIRX14
tidAT4G36890.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010051
IMP
Gene Ontologyxylem and phloem pattern formation1 2
GO:0010154
IMP
Gene Ontologyfruit development1 2
GO:0010417
IMP
IBA
Gene Ontologyglucuronoxylan biosynthetic process1 2 3
GO:0048367
IMP
Gene Ontologyshoot system development1 2
GO:0045492
IMP
Gene Ontologyxylan biosynthetic process4 5
GO:0048354
IMP
Gene Ontologymucilage biosynthetic process involved in seed coat development6 7
GO:0010246
IGI
Gene Ontologyrhamnogalacturonan I biosynthetic process8 9
GO:0048358
IGI
Gene Ontologymucilage pectin biosynthetic process8 9
GO:0009834
IBA
Gene Ontologyplant-type secondary cell wall biogenesis3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015018
IEA
Gene Ontologygalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity10
GO:0015018
IEA
InterProgalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0016757
ISS
Gene Ontologytransferase activity, transferring glycosyl groups11
GO:0042285
IMP
IBA
Gene Ontologyxylosyltransferase activity1 2 3
GO:0047517
IMP
Gene Ontology1,4-beta-D-xylan synthase activity6 7

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0005794
IDA
ISM
Gene OntologyGolgi apparatus12 13 14
GO:0016021
IEA
Gene Ontologyintegral component of membrane15
GO:0005768
IDA
Gene Ontologyendosome16 17
GO:0005802
IDA
Gene Ontologytrans-Golgi network16 17
GO:0000139
IBA
Gene OntologyGolgi membrane3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR029044Nucleotide-diphospho-sugar transferases
IPR005027Glycosyl transferase, family 43

Mapman id Description
21.2.2.1.3.3Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX14)