Gene: AT4G05000 (Arabidopsis thaliana)

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Gene Identifier
AT4G05000
Transcript Identifier
AT4G05000.2
Gene Type
Coding gene
Location
Chr4 : 2563953-2564585 : positive

Family Information

Homologous gene family
HOM04x5M005753
(54 genes in 35 species)
specific family
Orthologous gene family
ORTHO04x5M007082
(53 genes in 35 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Vacuolar protein sorting-associated protein VPS28 family protein
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Identifiers

Type Value
Dbxrefgene:1006228756,UniProt:Q9S9T7
symbolVPS28-2
tidAT4G05000.2

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway
GO:0043328
IBA
Gene Ontologyprotein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2 3
GO:0044877
IBA
Gene Ontologyprotein-containing complex binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000813
ISS, IBA
Gene OntologyESCRT I complex1 4 5
GO:0000813
IEA
InterProESCRT I complex
GO:0005634
ISM
Gene Ontologynucleus6
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT4G21560
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G21560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR038358VPS28, N-terminal domain superfamily
IPR037206VPS28, C-terminal domain superfamily
IPR007143Vacuolar protein sorting-associated Vps28
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminal
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminal
IPR037202ESCRT assembly domain

Mapman id Description
22.5.4.1.2Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.component VPS28