Gene: AT3G45560 (Arabidopsis thaliana)

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Gene Identifier
AT3G45560
Transcript Identifier
AT3G45560.1
Gene Type
Coding gene
Location
Chr3 : 16719630-16722674 : negative

Family Information

Homologous gene family
HOM04x5M000386
(467 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M002710
(102 genes in 34 species)
specific family

Descriptions

Description
zinc finger (C3HC4-type RING finger) family protein
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Identifiers

Type Value
Dbxrefgene:2085641,UniProt:Q9M1F1
tidAT3G45560.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0032436
IBA
Gene Ontologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process1
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process1
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT2G26130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
Gene Ontologynucleic acid binding2
GO:0003676
IEA
InterPronucleic acid binding
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0004523
IEA
Gene OntologyRNA-DNA hybrid ribonuclease activity2
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0008270
ISS
Gene Ontologyzinc ion binding3
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1
GO:0031624
IBA
Gene Ontologyubiquitin conjugating enzyme binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus4
GO:0000151
IBA
Gene Ontologyubiquitin ligase complex1
GO:0005737
IBA
Gene Ontologycytoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR036397Ribonuclease H superfamily
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR031127E3 ubiquitin ligase RBR family
IPR002156Ribonuclease H domain
IPR017907Zinc finger, RING-type, conserved site
IPR001841Zinc finger, RING-type

Mapman id Description
35.2not assigned.not annotated