Gene: AT3G45480 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G45480
Transcript Identifier
AT3G45480.1
Gene Type
Coding gene
Location
Chr3 : 16683263-16684592 : negative

Family Information

Homologous gene family
HOM04x5M000386
(467 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M002710
(102 genes in 34 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
RING/U-box protein with C6HC-type zinc finger
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Identifiers

Type Value
Dbxrefgene:2085636,UniProt:F4J5L3
tidAT3G45480.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0000209
IBA
Gene Ontologyprotein polyubiquitination1
GO:0032436
IBA
Gene Ontologypositive regulation of proteasomal ubiquitin-dependent protein catabolic process1
GO:0006511
IBA
Gene Ontologyubiquitin-dependent protein catabolic process1
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT2G26130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0031624
IBA
Gene Ontologyubiquitin conjugating enzyme binding1
GO:0061630
IBA
Gene Ontologyubiquitin protein ligase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1 2
GO:0000151
IBA
Gene Ontologyubiquitin ligase complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR036397Ribonuclease H superfamily
IPR031127E3 ubiquitin ligase RBR family
IPR002867IBR domain
IPR002156Ribonuclease H domain
IPR017907Zinc finger, RING-type, conserved site
IPR001841Zinc finger, RING-type
IPR012337Ribonuclease H-like superfamily

Mapman id Description
19.2.2.1.5.4.4Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)