Gene: AT2G47940 (Arabidopsis thaliana)

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Gene Identifier
AT2G47940
Transcript Identifier
AT2G47940.1
Gene Type
Coding gene
Location
Chr2 : 19618372-19622164 : negative

Family Information

Homologous gene family
HOM04x5M000925
(237 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M001715
(135 genes in 39 species)
specific family

Descriptions

Description
DEGP protease 2
Curated Summary
Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.
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Identifiers

Type Value
AliasDEGP2,DEGP protease 2,EMB3117,EMBRYO DEFECTIVE 3117
full_namedegradation of periplasmic proteins 2
DbxrefPMID:11179216,PMID:11299370,PMID:18431481,PMID:18633119,gene:3437482,UniProt:O82261
symbolDEG2
tidAT2G47940.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
ISS
IEA
Gene Ontologyproteolysis1 2
GO:0006508
IEA
InterProproteolysis
GO:0010206
IDA
Gene Ontologyphotosystem II repair3 4
GO:0009658
IMP
Gene Ontologychloroplast organization5 6
GO:0030163
IMP
Gene Ontologyprotein catabolic process5 6

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004252
IDA
IEA
Gene Ontologyserine-type endopeptidase activity7 8 9
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0008236
ISS
Gene Ontologyserine-type peptidase activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus10
GO:0009533
IDA
Gene Ontologychloroplast stromal thylakoid8 9
GO:0009535
IDA
Gene Ontologychloroplast thylakoid membrane8 9
GO:0009507
IDA
Gene Ontologychloroplast11 12
GO:0009570
IDA
Gene Ontologychloroplast stroma13 14
GO:0009941
IDA
Gene Ontologychloroplast envelope15 16

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR041517Protease Do-like, PDZ domain
IPR001478PDZ domain
IPR001940Peptidase S1C
IPR009003Peptidase S1, PA clan
IPR036034PDZ superfamily

Mapman id Description
19.4.2.3Protein homeostasis.proteolysis.serine-type peptidase activities.S1-class protease (Deg)