Gene: AT1G78240 (Arabidopsis thaliana)

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Gene Identifier
AT1G78240
Transcript Identifier
AT1G78240.1
Gene Type
Coding gene
Location
Chr1 : 29433173-29435815 : negative

Family Information

Homologous gene family
HOM04x5M000096
(1306 genes in 37 species)
specific family
Orthologous gene family
ORTHO04x5M003458
(86 genes in 36 species)
specific family

Descriptions

Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curated Summary
Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion and coordinated plant development.
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Identifiers

Type Value
AliasOSU1,QUA2,QUASIMODO2
full_nameTUMOROUS SHOOT DEVELOPMENT 2
DbxrefPMID:16618929,PMID:17461780,PMID:18355028,gene:2032129,UniProt:Q9C9Q8
symbolTSD2
tidAT1G78240.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007155
IEA
Gene Ontologycell adhesion1
GO:0032259
IEA
Gene Ontologymethylation1
GO:0009735
IMP
Gene Ontologyresponse to cytokinin2 3
GO:0048367
IMP
Gene Ontologyshoot system development2 3
GO:0010289
IMP
Gene Ontologyhomogalacturonan biosynthetic process4 5
GO:0048364
IMP
Gene Ontologyroot development6 7

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IMP
Gene Ontologymethyltransferase activity4 5
GO:0008168
IEA
InterPromethyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000139
IEA
Gene OntologyGolgi membrane8
GO:0005634
ISM
Gene Ontologynucleus9
GO:0016021
IEA
Gene Ontologyintegral component of membrane1
GO:0005794
IDA
IBA
Gene OntologyGolgi apparatus10 11 12
GO:0005768
IDA
IBA
Gene Ontologyendosome10 13 14
GO:0005802
IDA
IBA
Gene Ontologytrans-Golgi network10 13 14

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004159Putative S-adenosyl-L-methionine-dependent methyltransferase
IPR029063S-adenosyl-L-methionine-dependent methyltransferase

Mapman id Description
35.1not assigned.annotated