Gene: AT1G69670 (Arabidopsis thaliana)

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Gene Identifier
AT1G69670
Transcript Identifier
AT1G69670.1
Gene Type
Coding gene
Location
Chr1 : 26202169-26204442 : negative

Family Information

Homologous gene family
HOM04x5M000423
(437 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M002711
(102 genes in 39 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
cullin 3B
Curated Summary
cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.
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Identifiers

Type Value
AliasATCUL3B,ARABIDOPSIS THALIANA CULLIN 3B
DbxrefPMID:11019805,PMID:15659098,PMID:15772280,PMID:15749712,PMID:16045478,PMID:16280546,gene:2205019,UniProt:Q9C9L0
symbolCUL3B
tidAT1G69670.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
IBA
TAS
Gene Ontologyubiquitin-dependent protein catabolic process1 2 3
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0016567
IEA
Gene Ontologyprotein ubiquitination4
GO:0009793
IGI
Gene Ontologyembryo development ending in seed dormancy5 6
GO:0009960
IGI
Gene Ontologyendosperm development5 6
GO:0043161
IBA
Gene Ontologyproteasome-mediated ubiquitin-dependent protein catabolic process1
GO:0031146
IBA
Gene OntologySCF-dependent proteasomal ubiquitin-dependent protein catabolic process1
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT1G26830
GO:0009639
ISO
PLAZA Integrative Orthologyresponse to red or far red light AT1G26830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031625
IBA
Gene Ontologyubiquitin protein ligase binding1
GO:0031625
IEA
InterProubiquitin protein ligase binding
GO:0004842
ISS
Gene Ontologyubiquitin-protein transferase activity7
GO:0005515
IPI
Gene Ontologyprotein binding8 9

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus10
GO:0000151
TAS
Gene Ontologyubiquitin ligase complex2 3
GO:0019005
IPI
Gene OntologySCF ubiquitin ligase complex11 12
GO:0031461
IBA
Gene Ontologycullin-RING ubiquitin ligase complex1
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G26830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR036388Winged helix-like DNA-binding domain superfamily
IPR001373Cullin, N-terminal
IPR019559Cullin protein, neddylation domain
IPR016158Cullin homology domain
IPR036317Cullin homology domain superfamily
IPR036390Winged helix DNA-binding domain superfamily
IPR016159Cullin repeat-like-containing domain superfamily

Mapman id Description
19.2.2.8.2.1Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.scaffold component CUL3