Gene: AT1G64440 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G64440
Transcript Identifier
AT1G64440.1
Gene Type
Coding gene
Location
Chr1 : 23937102-23939565 : positive

Family Information

Homologous gene family
HOM04x5M000508
(377 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M001072
(179 genes in 39 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
NAD(P)-binding Rossmann-fold superfamily protein
Curated Summary
Encodes a protein with UDP-D-glucose 4-epimerase activity. Mutants in RHD1 have abnormally shaped root hairs with a bulbous region at the base. Allelic to REB1 encoding a UDP-D-glucose 4-epimerase involved in cell wall biosynthesis.Involved in growth and cell wall carbohydrate biosynthesis.
Show more...

Identifiers

Type Value
AliasREB1,ROOT EPIDERMAL BULGER1,UGE4,UDP-GLUCOSE 4-EPIMERASE
full_nameROOT HAIR DEFECTIVE 1
DbxrefPMID:17496119,gene:3688504,UniProt:Q9C7W7
symbolRHD1
tidAT1G64440.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006012
IEA
InterProgalactose metabolic process
GO:0010053
IMP
Gene Ontologyroot epidermal cell differentiation1 2
GO:0009832
TAS
Gene Ontologyplant-type cell wall biogenesis3 4
GO:0009969
IMP
Gene Ontologyxyloglucan biosynthetic process5 6
GO:0010246
IMP
Gene Ontologyrhamnogalacturonan I biosynthetic process5 6
GO:0010306
IMP
Gene Ontologyrhamnogalacturonan II biosynthetic process5 6
GO:0042546
IMP
Gene Ontologycell wall biogenesis7 8
GO:0019388
IBA
Gene Ontologygalactose catabolic process9
GO:0033499
IBA
Gene Ontologygalactose catabolic process via UDP-galactose9

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003978
IDA, IGI
IBA
TAS
Gene OntologyUDP-glucose 4-epimerase activity3 4 9 10 11
GO:0003978
IEA
InterProUDP-glucose 4-epimerase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISM
Gene OntologyGolgi apparatus12
GO:0005795
IDA
Gene OntologyGolgi stack10 11
GO:0005829
IBA
Gene Ontologycytosol9

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005886UDP-glucose 4-epimerase
IPR016040NAD(P)-binding domain
IPR036291NAD(P)-binding domain superfamily

Mapman id Description
3.13.8Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase