Gene: AT1G05260 (Arabidopsis thaliana)

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Gene Identifier
AT1G05260
Transcript Identifier
AT1G05260.1
Gene Type
Coding gene
Location
Chr1 : 1529827-1531271 : positive

Family Information

Homologous gene family
HOM04x5M000006
(5643 genes in 37 species)
specific family
Orthologous gene family
ORTHO04x5M000003
(4043 genes in 37 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Peroxidase superfamily protein
Curated Summary
Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.
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Identifiers

Type Value
AliasRCI3A
full_nameRARE COLD INDUCIBLE GENE 3
Dbxrefgene:2207209,UniProt:O23044
symbolRCI3
tidAT1G05260.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042744
IEA
Gene Ontologyhydrogen peroxide catabolic process1
GO:0042744
IEA
InterProhydrogen peroxide catabolic process
GO:0006979
IEA
Gene Ontologyresponse to oxidative stress2
GO:0006979
IEA
InterProresponse to oxidative stress
GO:0055114
IEA
Gene Ontologyoxidation-reduction process1
GO:0055114
IEA
InterProoxidation-reduction process
GO:0009269
IMP
Gene Ontologyresponse to desiccation3 4
GO:0009409
IEP
Gene Ontologyresponse to cold3 4
GO:0042538
IMP
Gene Ontologyhyperosmotic salinity response3 4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004601
IDA
ISS, IBA
Gene Ontologyperoxidase activity3 4 5 6
GO:0004601
IEA
InterProperoxidase activity
GO:0020037
IEA
Gene Ontologyheme binding2
GO:0020037
IEA
InterProheme binding
GO:0046872
IEA
Gene Ontologymetal ion binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
IEA
Gene Ontologyextracellular region7 8
GO:0005783
ISS
Gene Ontologyendoplasmic reticulum3 4
GO:0009505
IBA
Gene Ontologyplant-type cell wall5
GO:0009506
IBA
Gene Ontologyplasmodesma5
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G21770
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G21770
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G21770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033905Secretory peroxidase
IPR002016Haem peroxidase
IPR000823Plant peroxidase
IPR019794Peroxidase, active site
IPR019793Peroxidases heam-ligand binding site
IPR010255Haem peroxidase superfamily

Mapman id Description
35.1not assigned.annotated