Gene: ASH_gene21589 (Apostasia shenzhenica)

Overview top

Gene Identifier
ASH_gene21589
Transcript Identifier
ASH_rna21589
Gene Type
Coding gene
Location
KZ454830.1 : 475265-539762 : negative

Family Information

Homologous gene family
HOM04x5M003450
(78 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M004015
(77 genes in 38 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidrna21589
pidPKA45602.1
nameAXF42_Ash010941
idgene21589

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006388
IEA
InterProtRNA splicing, via endonucleolytic cleavage and ligation
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT1G07910
GO:0030968
ISO
PLAZA Integrative Orthologyendoplasmic reticulum unfolded protein response AT1G07910
GO:0010069
ISO
PLAZA Integrative Orthologyzygote asymmetric cytokinesis in embryo sac AT1G07910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003972
IEA
InterProRNA ligase (ATP) activity
GO:0051731
ISO
PLAZA Integrative Orthologypolynucleotide 5'-hydroxyl-kinase activity AT1G07910
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G07910
GO:0004113
ISO
PLAZA Integrative Orthology2',3'-cyclic-nucleotide 3'-phosphodiesterase activity AT1G07910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005844
ISO
PLAZA Integrative Orthologypolysome AT1G07910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G07910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR038837tRNA ligase 1

Mapman id Description
35.1not assigned.annotated