Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
TraesCS5A02G266600No description available.chr5A-View
TraesCS7D02G245800No description available.chr7D-View
TraesCS5D02G274400No description available.chr5D-View
TraesCS7A02G247200No description available.chr7A-View
TraesCS7B02G144300No description available.chr7B+View


Orthologs (inter-species colinear regions)

Ananas comosus

Gene id Description Chromosome Strand Multiplicon
Aco000751DNA-binding bromodomain-containing proteinLG02-View

Apostasia shenzhenica

Gene id Description Chromosome Strand Multiplicon
ASH_gene16039No description available.KZ452014.1-View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G60110DNA-binding bromodomain-containing protein DNA-binding bromodomain-containing protein%3B FUNCTIONS IN: DNA binding%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Bromodomain (InterPro:IPR001487)%3B BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G44430.1)%3B Has 40209 Blast hits to 25016 proteins in 1620 species: Archae - 68%3B Bacteria - 5263%3B Metazoa - 15621%3B Fungi - 3406%3B Plants - 1675%3B Viruses - 190%3B Other Eukaryotes - 13986 (source: NCBI BLink).Chr3+View
AT2G44430DNA-binding bromodomain-containing protein DNA-binding bromodomain-containing protein%3B FUNCTIONS IN: DNA binding%3B EXPRESSED IN: stem%2C male gametophyte%2C flower%2C carpel%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Bromodomain (InterPro:IPR001487)%2C MYB-like (InterPro:IPR017877)%3B BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1)%3B Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48%3B Bacteria - 2443%3B Metazoa - 11960%3B Fungi - 2852%3B Plants - 1222%3B Viruses - 306%3B Other Eukaryotes - 8352 (source: NCBI BLink).Chr2+View
AT2G42150DNA-binding bromodomain-containing protein DNA-binding bromodomain-containing protein%3B FUNCTIONS IN: DNA binding%3B LOCATED IN: nucleus%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Bromodomain (InterPro:IPR001487)%3B BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G57980.1)%3B Has 2988 Blast hits to 2572 proteins in 258 species: Archae - 0%3B Bacteria - 77%3B Metazoa - 1744%3B Fungi - 298%3B Plants - 259%3B Viruses - 10%3B Other Eukaryotes - 600 (source: NCBI BLink).Chr2+View
AT3G57980DNA-binding bromodomain-containing protein DNA-binding bromodomain-containing protein%3B FUNCTIONS IN: DNA binding%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Myb%2C DNA-binding (InterPro:IPR014778)%2C Bromodomain (InterPro:IPR001487)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%3B BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT2G42150.1)%3B Has 5050 Blast hits to 3932 proteins in 403 species: Archae - 12%3B Bacteria - 304%3B Metazoa - 2409%3B Fungi - 569%3B Plants - 345%3B Viruses - 12%3B Other Eukaryotes - 1399 (source: NCBI BLink).Chr3-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR0605G035No description available.AmTr_v1.0_scaffold00022-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi4g33820MYB-related transcription factorBd4-View
Bradi3g40060MYB-related transcription factorBd3-View

Cenchrus americanus

Gene id Description Chromosome Strand Multiplicon
Pgl_GLEAN_10009993No description available.chr7+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
p5.00_sc00131_p0015No description available.p5_sc00131+View
p5.00_sc00020_p0160No description available.EG5.1_Chr8+View
p5.00_sc00096_p0028No description available.EG5.1_Chr2-View
p5.00_sc00037_p0129No description available.EG5.1_Chr8+View

Hordeum vulgare

Gene id Description Chromosome Strand Multiplicon
HORVU7Hr1G050770Predicted proteinchr7H+View
HORVU5Hr1G073540No description available.chr5H-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
Ma08_g26310uncharacterized LOC103996267, transcript variant X1chr08+View
Ma09_g28270nucleolar and coiled-body phosphoprotein 1-likechr09+View
Ma09_g18710uncharacterized LOC103998475chr09-View
Ma09_g12020uncharacterized LOC103997714chr09+View

Miscanthus sinensis

Gene id Description Chromosome Strand Multiplicon
Misin13G182000No description available.Chr13-View
Misin07G233600No description available.Chr07+View
MisinT266000No description available.scaffold00576-View
Misin04G229900No description available.Chr04-View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB08G26960Uncharacterized protein8-View
OB09G21390No description available.9-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os08g39980DNA-binding bromodomain-containing protein, putative, expressedChr8-View
LOC_Os09g31454MYB family transcription factor, putative, expressedChr9-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0917730800.01protein_codingChr9-View
OsR498G0816445800.01protein_codingChr8-View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_20233Protein of unknown functionOropetium_genomic_20141112_068+View
Oropetium_20150105_14821Protein of unknown functionOropetium_genomic_20141112_044+View
Oropetium_20150105_05500Protein of unknown functionOropetium_genomic_20141112_008+View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000150G0150DNA-binding bromodomain-containing protein, putative, expressedPH01000150+View
PH01001573G0060MYB family transcription factor, putative, expressedPH01001573-View
PH01000770G0030MYB family transcription factor, putative, expressedPH01000770+View

Phalaenopsis equestris

Gene id Description Chromosome Strand Multiplicon
PEQU_14986No description available.Scaffold001116+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.003G212500No description available.Chr03-View
Potri.001G013600No description available.Chr01+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.007G209500similar to DNA-binding protein family-likeChr07+View
Sobic.002G248600weakly similar to Putative uncharacterized proteinChr02-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.6G206100No description available.scaffold_6-View
Seita.2G254700No description available.scaffold_2-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc01g073950.2Bromodomain protein (AHRD V1 ***- B9N6H8_POPTR); contains Interpro domain(s) IPR001487 BromodomainSL2.50ch01+View
Solyc01g006470.1Bromodomain protein (AHRD V1 *-*- B9GYV6_POPTR); contains Interpro domain(s) IPR001487 BromodomainSL2.50ch01-View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo12G0037800DNA-binding protein family-likepseudo12-View

Saccharum spontaneum

Gene id Description Chromosome Strand Multiplicon
Sspon.02G0037080-2CNo description available.Chr2C+View
Sspon.02G0037080-1BNo description available.Chr2B+View
Sspon.02G0037080-3DNo description available.Chr2D+View
Sspon.06G0001740-2DNo description available.Chr6D-View
Sspon.06G0001740-1ANo description available.Chr6A-View

Triticum turgidum

Gene id Description Chromosome Strand Multiplicon
TRITD5Bv1G149570DNA-binding bromodomain-containing proteinchr5B+View
TRITD7Av1G092980DNA-binding bromodomain-containing protein, putativechr7A-View
TRITD5Av1G160060DNA-binding bromodomain-containing proteinchr5A-View
TRITD7Bv1G067710DNA-binding bromodomain-containing protein, putativechr7B+View

Zea mays B73

Gene id Description Chromosome Strand Multiplicon
Zm00001d020947DNA-binding bromodomain-containing protein7-View
Zm00001d031454DNA-binding bromodomain-containing protein1-View

Zea mays B104

Gene id Description Chromosome Strand Multiplicon
Zm00007a00035265No description available.scaffold7.1844-View

Zea mays PH207

Gene id Description Chromosome Strand Multiplicon
Zm00008a003238No description available.chr01-View
Zm00008a028437No description available.chr07-View


Download

Gene id
Species
Description
Chromosome
Strand