Anchorpoints

Gene id
Aco012544
Organism
Ananas comosus

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Aco001634expansin A8LG18+View


Orthologs (inter-species colinear regions)

Apostasia shenzhenica

Gene id Description Chromosome Strand Multiplicon
ASH_gene16798No description available.KZ452023.1+View
ASH_gene270No description available.KZ451883.1+View

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G40610expansin A8 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al%2C 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A8 (EXPA8)%3B INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth%2C syncytium formation%2C unidimensional cell growth%2C plant-type cell wall loosening%3B LOCATED IN: endomembrane system%2C extracellular region%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Pollen allergen%2C N-terminal (InterPro:IPR014734)%2C Rare lipoprotein A (InterPro:IPR005132)%2C Pollen allergen/expansin%2C C-terminal (InterPro:IPR007117)%2C Barwin-related endoglucanase (InterPro:IPR009009)%2C Expansin (InterPro:IPR002963)%2C Expansin/Lol pI (InterPro:IPR007118)%2C Expansin 45%2C endoglucanase-like (InterPro:IPR007112)%3B BEST Arabidopsis thaliana protein match is: expansin A2 (TAIR:AT5G05290.1)%3B Has 2297 Blast hits to 2294 proteins in 186 species: Archae - 0%3B Bacteria - 19%3B Metazoa - 0%3B Fungi - 45%3B Plants - 2187%3B Viruses - 0%3B Other Eukaryotes - 46 (source: NCBI BLink).Chr2-View

Amborella trichopoda

Gene id Description Chromosome Strand Multiplicon
ATR1127G233No description available.AmTr_v1.0_scaffold00077+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi2g22290No description available.Bd2+View
Bradi2g53580No description available.Bd2+View

Calamus simplicifolius

Gene id Description Chromosome Strand Multiplicon
CALSI_Maker00027501No description available.scaffold307+View

Cenchrus americanus

Gene id Description Chromosome Strand Multiplicon
Pgl_GLEAN_10013049No description available.chr1-View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
p5.00_sc00003_p0304No description available.EG5.1_Chr5+View
p5.00_sc00007_p0095No description available.EG5.1_Chr5-View
p5.00_sc00015_p0036No description available.EG5.1_Chr10-View
p5.00_sc00033_p0120No description available.EG5.1_Chr14-View

Hordeum vulgare

Gene id Description Chromosome Strand Multiplicon
HORVU3Hr1G081180No description available.chr3H-View
HORVU1Hr1G069830No description available.chr1H+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
Ma11_g18210expansin-A2-likechr11+View
Ma07_g23580expansin-A4-likechr07+View
Ma06_g01050Hypothetical proteinchr06+View

Miscanthus sinensis

Gene id Description Chromosome Strand Multiplicon
Misin05G317500No description available.Chr05-View
Misin17G172100No description available.Chr17+View
Misin16G173300No description available.Chr16+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB03G26230Uncharacterized protein3+View
OB05G27760Uncharacterized protein5-View
OB01G44250Uncharacterized protein1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
LOC_Os03g21820expansin precursor, putative, expressedChr3-View
LOC_Os01g60770expansin precursor, putative, expressedChr1+View
LOC_Os05g39990expansin precursor, putative, expressedChr5-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OsR498G0511044800.01protein_codingChr5-View
OsR498G0102236100.01No description available.Chr1+View

Phyllostachys edulis

Gene id Description Chromosome Strand Multiplicon
PH01000009G2460expansin precursor, putative, expressedPH01000009+View
PH01000659G0190expansin precursor, putative, expressedPH01000659+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
Potri.006G108000No description available.Chr06-View
Potri.019G057500similar to Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8) (Ath-ExpAlpha- 1.11).; [ ortholog of At2g40610,]Chr19-View
Potri.013G154700similar to expansin S1 precursor. [ORG:Cucumis sativus]; [ co-ortholog (10of10) of BAD00016, T10079, CAC19183, CAD19044, BAC05513, AAR09169, AAB37746, AAM88862, AAM89261, CAD19043, BAD00013, CAD28984, CAC19184, AAK72874, ]Chr13+View
Potri.016G135200similar to expansin S1 precursor. [ORG:Cucumis sativus]; [ co-ortholog (7of10) of BAD00016, T10079, CAC19183, CAD19044, BAC05513, AAR09169, AAB37746, AAM88862, AAM89261, CAD19043, BAD00013, CAD28984, CAC19184, AAK72874, ]Chr16-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.009G173700similar to Expansin-A4 precursorChr09-View
Sobic.003G338801similar to Alpha-expansin 1 precursorChr03+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.5G363100No description available.scaffold_5+View
Seita.3G204900No description available.scaffold_3+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc05g052250.2Expansin 2 (AHRD V1 ***- C0LU46_CITSI); contains Interpro domain(s) IPR002963 ExpansinSL2.50ch05+View

Spirodela polyrhiza

Gene id Description Chromosome Strand Multiplicon
Spipo22G0026300Expansinpseudo22+View

Saccharum spontaneum

Gene id Description Chromosome Strand Multiplicon
Sspon.03G0003660-2PNo description available.Chr7C+View
Sspon.03G0003660-3PNo description available.Chr7D-View
Sspon.03G0003660-1ANo description available.Chr3A-View
Sspon.03G0003660-1PNo description available.Chr7A+View

Triticum aestivum

Gene id Description Chromosome Strand Multiplicon
TraesCS1D02G299700No description available.chr1D-View
TraesCS3A02G344800No description available.chr3A+View
TraesCS3D02G338400No description available.chr3D+View
TraesCS1B02G310300No description available.chr1B-View
TraesCS3B02G376800No description available.chr3B+View
TraesCS1A02G300200No description available.chr1A-View

Triticum turgidum

Gene id Description Chromosome Strand Multiplicon
TRITD1Bv1G169620Expansinchr1B-View
TRITD1Av1G182330Expansinchr1A-View
TRITD3Av1G212210Expansinchr3A+View
TRITD3Bv1G194780Expansinchr3B+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01032681001No description available.chr13+View
GSVIVG01024572001No description available.chr6-View
GSVIVG01030192001No description available.chr8-View

Zoysia japonica ssp. nagirizaki

Gene id Description Chromosome Strand Multiplicon
Zjn_sc00009.1.g08130.1.am.mkNo description available.Zjn_sc00009.1-View
Zjn_sc00040.1.g03690.1.sm.mkNo description available.Zjn_sc00040.1+View
Zjn_sc00012.1.g07220.1.sm.mkNo description available.Zjn_sc00012.1-View

Zea mays B73

Gene id Description Chromosome Strand Multiplicon
Zm00001d038476alpha expansin56-View
Zm00001d043047Alpha-expansin 1 Expansin-A23-View

Zea mays PH207

Gene id Description Chromosome Strand Multiplicon
Zm00008a013461No description available.chr03-View
Zm00008a026018No description available.chr06-View

Zostera marina

Gene id Description Chromosome Strand Multiplicon
Zosma196g00420Expansinscaffold_196+View
Zosma56g01230Expansin-A8scaffold_56+View


Download

Gene id
Species
Description
Chromosome
Strand