Anchorpoints

Gene id
AT1G69670
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G26830cullin 3 Cullin%2C putative%2C similar to Cullin homolog 3 (CUL-3) SP:Q13618%2C GI:3639052 from (Homo sapiens)%3B contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. cullin 3 (CUL3)%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C Cullin homology (InterPro:IPR016158)%2C Cullin protein%2C neddylation domain (InterPro:IPR019559)%2C Cullin%2C N-terminal (InterPro:IPR001373)%2C Cullin repeat-like-containing domain (InterPro:IPR016159)%3B BEST Arabidopsis thaliana protein match is: cullin 3B (TAIR:AT1G69670.1)%3B Has 2310 Blast hits to 2269 proteins in 235 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 1034%3B Fungi - 455%3B Plants - 372%3B Viruses - 0%3B Other Eukaryotes - 440 (source: NCBI BLink).Chr1+View


Orthologs (inter-species colinear regions)

Asparagus officinalis

Gene id Description Chromosome Strand Multiplicon
evm.TU.AsparagusV1_03.1701.V1.1No description available.AsparagusV1_03-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
Bradi3g59330Cullin, subfamily cullin, putativeBd3+View

Cenchrus americanus

Gene id Description Chromosome Strand Multiplicon
Pgl_GLEAN_10018515No description available.chr3+View

Elaeis guineensis

Gene id Description Chromosome Strand Multiplicon
p5.00_sc00035_p0045No description available.EG5.1_Chr13-View
p5.00_sc00149_p0003No description available.EG5.1_Chr7+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
Ma07_g19280cullin-3Bchr07+View

Oryza brachyantha

Gene id Description Chromosome Strand Multiplicon
OB02G39400Uncharacterized protein2-View

Oropetium thomaeum

Gene id Description Chromosome Strand Multiplicon
Oropetium_20150105_04199Similar to CUL3A: Cullin-3A (Arabidopsis thaliana)Oropetium_genomic_20141112_012-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
Sobic.004G237400similar to Putative uncharacterized proteinChr04+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
Seita.1G319400No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
Solyc01g010820.2Cullin C (AHRD V1 ***- D3BHJ6_POLPA); contains Interpro domain(s) IPR001373 Cullin, N-terminalSL2.50ch01+View
Solyc02g087900.2Cullin C (AHRD V1 ***- D3BHJ6_POLPA); contains Interpro domain(s) IPR001373 Cullin, N-terminalSL2.50ch02+View

Triticum aestivum

Gene id Description Chromosome Strand Multiplicon
TraesCS6B02G335200TraesCS6B01G335200chr6B+View
TraesCS6A02G306600TraesCS6A01G306600chr6A+View

Triticum turgidum

Gene id Description Chromosome Strand Multiplicon
TRITD6Av1G188910Cullin family proteinchr6A+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
GSVIVG01020008001No description available.chr1+View
GSVIVG01011387001No description available.chr14+View

Zea mays B73

Gene id Description Chromosome Strand Multiplicon
Zm00001d018043Cullin-3B5-View

Zea mays PH207

Gene id Description Chromosome Strand Multiplicon
Zm00008a022983No description available.chr05-View


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Gene id
Species
Description
Chromosome
Strand