Integrative Orthology Viewer: Sspon.07G0001390-2D (Saccharum spontaneum) top


Inparalogs

Organism Source Genes #genes Details
Saccharum spontaneumOrthologous gene familySspon.04G0005240-2D Sspon.01G0027040-2D Sspon.02G0012580-1P ...36
Anchor pointSspon.07G0030100-1C 1
Tree-based orthologSspon.07G0030100-2D Sspon.07G0001390-2D 2
Best-Hits-and-Inparalogs(BHI)familySspon.07G0001390-1A Sspon.07G0001390-2D 2

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0022G019 ATR0782G089 ATR0598G153 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-manyATR0022G019 ATR0782G089 2
Tree-based orthologmany-to-manyATR0598G153 ATR0564G521 ATR1089G006 3
Ananas comosusOrthologous gene familymany-to-manyAco012619 Aco003398 Aco002750 ...10
Anchor point1-to-1Aco005374 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Aco005374 1
Tree-based orthologmany-to-1Aco005374 1
Apostasia shenzhenicaOrthologous gene familymany-to-manyASH_gene20204 ASH_gene5238 ASH_gene16759 ...10
Best-Hits-and-Inparalogs(BHI)familymany-to-1ASH_gene5238 1
Tree-based orthologmany-to-1ASH_gene5238 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT5G60480 AT5G65410 AT4G24660 ...17
Tree-based orthologmany-to-manyAT5G60480 AT5G39760 AT3G28920 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1AT4G24660 1
Asparagus officinalisOrthologous gene familymany-to-manyevm.TU.AsparagusV1_04.1921.V1.1 evm.TU.AsparagusV1_03.43.V1.1 evm.TU.AsparagusV1_07.3608.V1.1 ...4
Tree-based orthologmany-to-manyevm.TU.AsparagusV1_03.43.V1.1 evm.TU.AsparagusV1_01.2745.V1.1 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1evm.TU.AsparagusV1_01.2745.V1.1 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi3g38430 Bradi4g26093 Bradi2g14927 ...17
Anchor point1-to-manyBradi2g14927 Bradi2g44540 2
Tree-based orthologmany-to-manyBradi2g14927 Bradi2g44540 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bradi4g40270 1
Calamus simplicifoliusOrthologous gene familymany-to-manyCALSI_Maker00009049 CALSI_Maker00008689 CALSI_Maker00011750 ...32
Anchor point1-to-1CALSI_Maker00011694 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1CALSI_Maker00024428 1
Tree-based orthologmany-to-1CALSI_Maker00037666 1
Cenchrus americanusOrthologous gene familymany-to-manyPgl_GLEAN_10009916 Pgl_GLEAN_10032934 Pgl_GLEAN_10009497 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1Pgl_GLEAN_10032934 1
Tree-based orthologmany-to-1Pgl_GLEAN_10035508 1
Elaeis guineensisOrthologous gene familymany-to-manyp5.00_sc00164_p0013 p5.00_sc00149_p0007 p5.00_sc00049_p0014 ...18
Best-Hits-and-Inparalogs(BHI)familymany-to-manyp5.00_sc00036_p0180 p5.00_sc00063_p0010 2
Anchor point1-to-1p5.00_sc00008_p0275 1
Tree-based orthologmany-to-1p5.00_sc00008_p0275 1
Hordeum vulgareOrthologous gene familymany-to-manyHORVU5Hr1G069730 HORVU5Hr1G065740 HORVU6Hr1G069090 ...11
Anchor point1-to-1HORVU1Hr1G091470 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1HORVU1Hr1G091470 1
Tree-based orthologmany-to-1HORVU1Hr1G091470 1
Lolium perenneOrthologous gene familymany-to-manyLP008113 LP024537 LP005053 ...14
Tree-based orthologmany-to-manyLP024537 LP021143 LP037918 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1LP035967 1
Marchantia polymorphaOrthologous gene familymany-to-1Mapoly0063s0098 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Mapoly0063s0098 1
Tree-based orthologmany-to-1Mapoly0063s0098 1
Miscanthus sinensisOrthologous gene familymany-to-manyMisin03G197300 Misin17G254600 Misin04G053200 ...28
Anchor point1-to-manyMisin17G254600 Misin08G256700 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Misin17G254600 1
Tree-based orthologmany-to-1Misin17G254600 1
Musa acuminataOrthologous gene familymany-to-manyMa03_g32310 Ma01_g06820 Ma09_g07750 ...30
Best-Hits-and-Inparalogs(BHI)familymany-to-manyMa03_g32310 Ma08_g27670 Ma04_g14890 ...7
Tree-based orthologmany-to-manyMa03_g32310 Ma08_g27670 Ma04_g14890 ...7
Anchor point1-to-manyMa04_g07880 Ma07_g27080 2
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_19297 Oropetium_20150105_03770 Oropetium_20150105_20867 ...14
Anchor point1-to-1Oropetium_20150105_03770 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Oropetium_20150105_03770 1
Tree-based orthologmany-to-1Oropetium_20150105_03770 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G33260 OB11G11270 OB02G36730 ...7
Anchor point1-to-1OB01G33260 1
Tree-based orthologmany-to-manyOB01G33260 OB11G11270 OB02G36730 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1OB09G19830 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G1220862500.01 OsR498G0101603800.01 OsR498G0816316600.01 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1OsR498G0101603800.01 1
Tree-based orthologmany-to-1OsR498G0101603800.01 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os03g50920 LOC_Os09g29130 LOC_Os09g24810 ...12
Anchor point1-to-1LOC_Os05g50310 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1LOC_Os05g50310 1
Tree-based orthologmany-to-1LOC_Os05g50310 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_36005 PEQU_21273 PEQU_17358 ...15
Best-Hits-and-Inparalogs(BHI)familymany-to-1PEQU_21273 1
Tree-based orthologmany-to-1PEQU_08240 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000273G0040 PH01000197G0150 PH01002025G0150 ...14
Anchor point1-to-1PH01000983G0460 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1PH01000983G0460 1
Tree-based orthologmany-to-1PH01000983G0460 1
Physcomitrium patensOrthologous gene familymany-to-manyPp3c19_20410 Pp3c3_22600 Pp3c1_15290 ...12
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPp3c19_20410 Pp3c22_9600 Pp3c2_21160 ...5
Tree-based orthologmany-to-manyPp3c19_20410 Pp3c1_15290 Pp3c6_28300 ...9
Picea abiesOrthologous gene familymany-to-manyPAB00024928 PAB00024163 PAB00020661 ...27
Best-Hits-and-Inparalogs(BHI)familymany-to-1PAB00002012 1
Tree-based orthologmany-to-1PAB00007528 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.003G000400 Potri.004G126500 Potri.013G108900 ...22
Tree-based orthologmany-to-manyPotri.003G000400 Potri.004G126500 Potri.013G108900 ...11
Anchor point1-to-1Potri.007G024100 1
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPotri.007G024100 Potri.005G227900 Potri.002G035200 3
Selaginella moellendorffiiOrthologous gene familymany-to-manygene7260 gene24804 gene6248 ...12
Tree-based orthologmany-to-manygene23842 gene25018 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manygene24155 gene6735 gene37334 3
Setaria italicaOrthologous gene familymany-to-manySeita.2G200300 Seita.2G204400 Seita.5G273000 ...16
Anchor point1-to-1Seita.3G134200 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Seita.3G134200 1
Tree-based orthologmany-to-1Seita.3G134200 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc03g116070.1 Solyc05g051420.1 Solyc02g067330.1 ...18
Best-Hits-and-Inparalogs(BHI)familymany-to-1Solyc02g085160.1 1
Tree-based orthologmany-to-manySolyc02g067310.2 Solyc02g067320.1 Solyc01g102980.2 ...6
Sorghum bicolorOrthologous gene familymany-to-manySobic.007G160400 Sobic.008G073200 Sobic.002G231100 ...15
Anchor point1-to-1Sobic.009G244200 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Sobic.009G244200 1
Tree-based orthologmany-to-1Sobic.009G244200 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo3G0015500 Spipo0G0179300 Spipo4G0101000 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1Spipo0G0019400 1
Tree-based orthologmany-to-1Spipo0G0019400 1
Triticum aestivumOrthologous gene familymany-to-manyTraesCS6D02G253700 TraesCS1A02G087700 TraesCS5D02G234700 ...37
Anchor point1-to-manyTraesCS3B02G258400 TraesCS1D02G426300 TraesCS3A02G226100 ...6
Tree-based orthologmany-to-manyTraesCS3B02G258400 TraesCS1D02G426300 TraesCS3A02G226100 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyTraesCS1D02G426300 TraesCS1B02G448600 2
Triticum turgidumOrthologous gene familymany-to-manyTRITD2Bv1G152570 TRITD5Av1G108630 TRITD4Bv1G031510 ...20
Anchor point1-to-manyTRITD1Av1G221650 TRITD1Bv1G219300 TRITD3Av1G152090 ...4
Tree-based orthologmany-to-manyTRITD1Av1G221650 TRITD1Bv1G219300 TRITD3Av1G152090 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1TRITD1Bv1G219300 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01009128001 GSVIVG01023137001 GSVIVG01019981001 ...11
Best-Hits-and-Inparalogs(BHI)familymany-to-1GSVIVG01009128001 1
Tree-based orthologmany-to-manyGSVIVG01023137001 GSVIVG01011413001 GSVIVG01012772001 ...4
Zea mays B73Orthologous gene familymany-to-manyZm00001d013409 Zm00001d009674 Zm00001d032175 ...22
Anchor point1-to-manyZm00001d009674 Zm00001d017784 2
Tree-based orthologmany-to-1Zm00001d009674 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d039116 1
Zea mays B104Orthologous gene familymany-to-manyZm00007a00007128 Zm00007a00020504 Zm00007a00003955 ...20
Anchor point1-to-1Zm00007a00026347 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00007a00026347 1
Tree-based orthologmany-to-manyZm00007a00026347 Zm00007a00016797 2
Zea mays PH207Orthologous gene familymany-to-manyZm00008a003745 Zm00008a030853 Zm00008a028033 ...16
Anchor point1-to-manyZm00008a030853 Zm00008a022773 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00008a030853 1
Tree-based orthologmany-to-manyZm00008a005011 Zm00008a019514 Zm00008a015156 3
Zostera marinaOrthologous gene familymany-to-manyZosma161g00190 Zosma83g00210 Zosma2g01850 ...9
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zosma161g00190 1
Tree-based orthologmany-to-1Zosma2g01850 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00028.1.g00370.1.am.mk Zjn_sc00031.1.g00600.1.am.mk Zjn_sc00132.1.g00550.1.sm.mk ...22
Anchor point1-to-manyZjn_sc00027.1.g00780.1.sm.mk Zjn_sc00012.1.g00780.1.am.mk 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zjn_sc00012.1.g00780.1.am.mk 1
Tree-based orthologmany-to-1Zjn_sc00012.1.g00780.1.am.mk 1
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