Integrative Orthology Viewer: Sobic.003G171500 (Sorghum bicolor) top


Inparalogs

Organism Source Genes #genes Details
Sorghum bicolorOrthologous gene familySobic.003G101700 Sobic.005G163400 Sobic.007G060550 ...12
Best-Hits-and-Inparalogs(BHI)familySobic.003G171500 1
Tree-based orthologSobic.003G171500 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-1ATR0706G003 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0706G003 1
Tree-based ortholog1-to-1ATR0706G003 1
Ananas comosusOrthologous gene familymany-to-manyAco029009 Aco000648 Aco026007 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco000648 1
Tree-based ortholog1-to-1Aco000648 1
Apostasia shenzhenicaOrthologous gene familymany-to-manyASH_gene6621 ASH_gene13104 ASH_gene8569 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyASH_gene13104 ASH_gene8569 2
Tree-based ortholog1-to-manyASH_gene13104 ASH_gene8569 2
Arabidopsis thalianaOrthologous gene familymany-to-manyAT5G27240 AT3G06340 AT3G05110 ...9
Tree-based ortholog1-to-manyAT5G27240 AT3G06340 AT5G18750 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1AT5G18750 1
Asparagus officinalisOrthologous gene familymany-to-manyevm.TU.AsparagusV1_02.2047.V1.1 evm.TU.AsparagusV1_05.114.V1.1 evm.TU.AsparagusV1_07.1374.V1.1 ...4
Tree-based ortholog1-to-1evm.TU.AsparagusV1_02.2047.V1.1 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyevm.TU.AsparagusV1_05.114.V1.1 evm.TU.AsparagusV1_07.1374.V1.1 2
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g76707 Bradi4g15440 Bradi2g13157 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyBradi1g76707 Bradi2g13157 2
Tree-based ortholog1-to-manyBradi1g76707 Bradi2g13157 2
Anchor pointN/ABradi2g13157 1
Calamus simplicifoliusOrthologous gene familymany-to-manyCALSI_Maker00038851 CALSI_Maker00003062 CALSI_Maker00016678 3
Best-Hits-and-Inparalogs(BHI)family1-to-1CALSI_Maker00003062 1
Tree-based ortholog1-to-manyCALSI_Maker00003062 CALSI_Maker00016678 2
Cenchrus americanusOrthologous gene familymany-to-manyPgl_GLEAN_10008346 Pgl_GLEAN_10022054 Pgl_GLEAN_10008348 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyPgl_GLEAN_10018928 Pgl_GLEAN_10030105 2
Tree-based ortholog1-to-manyPgl_GLEAN_10018928 Pgl_GLEAN_10030105 2
Chlamydomonas reinhardtiiBest-Hits-and-Inparalogs(BHI)family1-to-1Cre09.g416100 1
Elaeis guineensisOrthologous gene familymany-to-manyp5.00_sc00173_p0045 p5.00_sc00010_p0194 2
Best-Hits-and-Inparalogs(BHI)family1-to-1p5.00_sc00173_p0045 1
Tree-based ortholog1-to-manyp5.00_sc00173_p0045 p5.00_sc00010_p0194 2
Hordeum vulgareOrthologous gene familymany-to-manyHORVU3Hr1G051850 HORVU7Hr1G050080 HORVU2Hr1G013270 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1HORVU3Hr1G051850 1
Tree-based ortholog1-to-1HORVU3Hr1G051850 1
Lolium perenneOrthologous gene familymany-to-manyLP004012 LP039431 LP008879 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-manyLP004012 LP005610 2
Tree-based ortholog1-to-manyLP004012 LP005610 2
Marchantia polymorphaBest-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0002s0125 1
Tree-based ortholog1-to-manyMapoly0002s0125 Mapoly0009s0199 2
Micromonas commodaBest-Hits-and-Inparalogs(BHI)family1-to-1MCO13G236 1
Miscanthus sinensisOrthologous gene familymany-to-manyMisin10G136000 Misin05G157100 Misin19G216900 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-1Misin05G157100 1
Tree-based ortholog1-to-1Misin05G157100 1
Musa acuminataOrthologous gene familymany-to-manyMa11_g12890 Ma05_g00420 Ma02_g04330 3
Tree-based ortholog1-to-1Ma11_g12890 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyMa05_g00420 Ma02_g04330 2
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_20587 Oropetium_20150105_13349 Oropetium_20150105_25444 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_20588 1
Tree-based ortholog1-to-1Oropetium_20150105_20588 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB06G25080 OB01G25670 OB11G23470 3
Best-Hits-and-Inparalogs(BHI)family1-to-1OB01G25670 1
Tree-based ortholog1-to-1OB01G25670 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G1120404900.01 OsR498G1120403100.01 OsR498G0612690000.01 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0100985200.01 1
Tree-based ortholog1-to-1OsR498G0100985200.01 1
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g27740 LOC_Os11g36560 LOC_Os06g34440 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os01g27740 1
Tree-based ortholog1-to-1LOC_Os01g27740 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_19728 PEQU_29533 PEQU_29677 3
Tree-based ortholog1-to-manyPEQU_19728 PEQU_29533 2
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_29677 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000637G0020 PH01000725G0500 PH01001604G0360 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyPH01000725G0500 PH01001604G0360 2
Tree-based ortholog1-to-manyPH01000725G0500 PH01001604G0360 2
Physcomitrium patensBest-Hits-and-Inparalogs(BHI)family1-to-manyPp3c12_1490 Pp3c17_2560 2
Tree-based ortholog1-to-manyPp3c12_1490 Pp3c17_2560 Pp3c3_5070 ...9
Picea abiesBest-Hits-and-Inparalogs(BHI)family1-to-1PAB00064809 1
Tree-based ortholog1-to-manyPAB00048836 PAB00014027 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.008G196201 Potri.010G020400 Potri.005G043200 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.010G020400 Potri.010G018800 2
Tree-based ortholog1-to-manyPotri.010G020400 Potri.005G043200 Potri.010G018800 ...4
Saccharum spontaneumOrthologous gene familymany-to-manySspon.03G0046800-1D Sspon.03G0018680-4D Sspon.03G0018680-2B ...28
Tree-based ortholog1-to-manySspon.06G0015830-1A Sspon.06G0015840-1P Sspon.06G0015840-4D ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manySspon.06G0015840-2P Sspon.06G0025750-1B Sspon.06G0025750-2C 3
Selaginella moellendorffiiBest-Hits-and-Inparalogs(BHI)family1-to-manygene29446 gene19534 2
Tree-based ortholog1-to-manygene19535 gene29447 2
Setaria italicaOrthologous gene familymany-to-manySeita.7G282100 Seita.4G227200 Seita.8G159800 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manySeita.4G227200 Seita.5G172100 2
Tree-based ortholog1-to-manySeita.4G227200 Seita.5G172100 2
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g098340.2 Solyc01g098300.1 Solyc01g098330.1 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-manySolyc01g057750.1 Solyc01g067780.1 2
Tree-based ortholog1-to-manySolyc01g067780.1 Solyc08g029220.1 Solyc01g098250.2 3
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo6G0043100 Spipo22G0010400 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo6G0043100 1
Tree-based ortholog1-to-manySpipo6G0043100 Spipo22G0010400 2
Triticum aestivumOrthologous gene familymany-to-manyTraesCS4B02G101500 TraesCS2B02G366100 TraesCS2D02G077700 ...21
Tree-based ortholog1-to-manyTraesCS3B02G244000 TraesCS3D02G215900 TraesCS3A02G213800 3
Best-Hits-and-Inparalogs(BHI)family1-to-1TraesCS3A02G213800 1
Triticum turgidumOrthologous gene familymany-to-manyTRITD2Av1G018950 TRITD3Bv1G125090 TRITD2Av1G019880 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1TRITD3Bv1G125090 1
Tree-based ortholog1-to-manyTRITD3Bv1G125090 TRITD3Av1G138340 2
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01021980001 GSVIVG01017824001 2
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01021980001 1
Tree-based ortholog1-to-1GSVIVG01021980001 1
Zea mays B73Orthologous gene familymany-to-manyZm00001d008412 Zm00001d008413 Zm00001d052947 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d040846 1
Tree-based ortholog1-to-1Zm00001d040846 1
Zea mays B104Orthologous gene familymany-to-manyZm00007a00000171 Zm00007a00047768 Zm00007a00031006 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00007a00031006 1
Tree-based ortholog1-to-1Zm00007a00031006 1
Zea mays PH207Orthologous gene familymany-to-manyZm00008a011871 Zm00008a029956 Zm00008a029955 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00008a011871 1
Tree-based ortholog1-to-1Zm00008a011871 1
Zostera marinaOrthologous gene familymany-to-manyZosma12g00210 Zosma55g00790 2
Tree-based ortholog1-to-manyZosma12g00210 Zosma55g00790 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma55g00790 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-1Zjn_sc00005.1.g00150.1.cf.mkhc 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00005.1.g00150.1.cf.mkhc 1
Tree-based ortholog1-to-1Zjn_sc00005.1.g00150.1.cf.mkhc 1
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