Integrative Orthology Viewer: LOC_Os08g39970 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os09g10710 LOC_Os04g56440 LOC_Os08g39970 ...4
Best-Hits-and-Inparalogs(BHI)familyLOC_Os08g39970 1
Tree-based orthologLOC_Os08g39970 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0605G319 ATR0605G153 ATR0697G183 3
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0605G319 1
Tree-based ortholog1-to-1ATR0605G319 1
Ananas comosusOrthologous gene familymany-to-manyAco015344 Aco009718 Aco001379 ...6
Anchor pointN/AAco015344 Aco015678 2
Tree-based ortholog1-to-1Aco001379 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco015678 1
Apostasia shenzhenicaOrthologous gene familymany-to-1ASH_gene16038 1
Anchor pointN/AASH_gene16038 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ASH_gene16038 1
Tree-based ortholog1-to-1ASH_gene16038 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT5G13020 AT2G44440 AT3G12140 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1AT5G13020 1
Tree-based ortholog1-to-manyAT5G13020 AT2G44440 AT3G12140 ...4
Anchor pointN/AAT3G57970 1
Asparagus officinalisOrthologous gene familymany-to-manyevm.TU.AsparagusV1_01.3313.V1.1 evm.TU.AsparagusV1_01.3402.V1.1 evm.TU.AsparagusV1_05.1460.V1.1 ...4
Anchor pointN/Aevm.TU.AsparagusV1_01.3313.V1.1 1
Tree-based ortholog1-to-manyevm.TU.AsparagusV1_01.3313.V1.1 evm.TU.AsparagusV1_05.1460.V1.1 evm.TU.AsparagusV1_05.3090.V1.1 3
Best-Hits-and-Inparalogs(BHI)family1-to-1evm.TU.AsparagusV1_05.3090.V1.1 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi4g33810 Bradi3g22495 Bradi3g22480 3
Anchor pointN/ABradi4g33810 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi4g33810 1
Tree-based ortholog1-to-1Bradi4g33810 1
Calamus simplicifoliusOrthologous gene familymany-to-manyCALSI_Maker00038310 CALSI_Maker00038487 CALSI_Maker00010724 ...7
Tree-based ortholog1-to-manyCALSI_Maker00010724 CALSI_Maker00044669 CALSI_Maker00046460 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1CALSI_Maker00044669 1
Cenchrus americanusOrthologous gene familymany-to-manyPgl_GLEAN_10002114 Pgl_GLEAN_10009992 Pgl_GLEAN_10004062 ...4
Anchor pointN/APgl_GLEAN_10002114 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Pgl_GLEAN_10002114 1
Tree-based ortholog1-to-1Pgl_GLEAN_10002114 1
Elaeis guineensisOrthologous gene familymany-to-manyp5.00_sc00131_p0017 p5.00_sc00004_p0429 p5.00_sc00096_p0029 ...5
Anchor pointN/Ap5.00_sc00131_p0017 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyp5.00_sc00131_p0017 p5.00_sc00096_p0029 p5.00_sc00020_p0161 3
Tree-based ortholog1-to-manyp5.00_sc00131_p0017 p5.00_sc00096_p0029 p5.00_sc00020_p0161 3
Hordeum vulgareOrthologous gene familymany-to-manyHORVU5Hr1G053150 HORVU5Hr1G073510 2
Best-Hits-and-Inparalogs(BHI)family1-to-1HORVU5Hr1G053150 1
Tree-based ortholog1-to-1HORVU5Hr1G053150 1
Anchor pointN/AHORVU5Hr1G073510 1
Lolium perenneOrthologous gene familymany-to-manyLP030103 LP021974 2
Best-Hits-and-Inparalogs(BHI)family1-to-1LP030103 1
Tree-based ortholog1-to-1LP030103 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0008s0163 Mapoly0069s0030 2
Tree-based ortholog1-to-manyMapoly0008s0163 Mapoly0069s0030 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0069s0030 1
Micromonas commodaOrthologous gene familymany-to-1MCO09G400 1
Tree-based ortholog1-to-1MCO09G400 1
Miscanthus sinensisOrthologous gene familymany-to-manyMisin13G079100 Misin07G233700 MisinT265900 ...10
Anchor pointN/AMisin07G233700 Misin04G229300 Misin13G181900 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Misin07G233700 1
Tree-based ortholog1-to-manyMisin07G233700 Misin13G181900 2
Musa acuminataOrthologous gene familymany-to-manyMa06_g00460 Ma04_g03960 Ma04_g13230 ...7
Tree-based ortholog1-to-manyMa06_g00460 Ma04_g03960 Ma04_g13230 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Ma04_g13230 1
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_25263 Oropetium_20150105_05502 Oropetium_20150105_25950 3
Anchor pointN/AOropetium_20150105_05502 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_05502 1
Tree-based ortholog1-to-1Oropetium_20150105_05502 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB08G19480 OB09G12180 OB09G21380 3
Anchor pointN/AOB09G21380 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OB09G21380 1
Tree-based ortholog1-to-1OB09G21380 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0916903600.01 OsR498G0815792700.01 OsR498G0409425700.01 3
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0815792700.01 1
Tree-based ortholog1-to-1OsR498G0409425700.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_14989 PEQU_35560 2
Anchor pointN/APEQU_14989 1
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_14989 1
Tree-based ortholog1-to-manyPEQU_14989 PEQU_35560 2
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000800G0330 PH01000119G0500 PH01004584G0030 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyPH01000770G0050 PH01001573G0050 2
Anchor pointN/APH01000150G0210 1
Tree-based ortholog1-to-1PH01000150G0210 1
Physcomitrium patensOrthologous gene familymany-to-1Pp3c16_11440 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Pp3c16_11440 1
Tree-based ortholog1-to-1Pp3c16_11440 1
Picea abiesOrthologous gene familymany-to-manyPAB00033753 PAB00040934 PAB00039633 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00060438 1
Tree-based ortholog1-to-manyPAB00060438 PAB00021336 2
Populus trichocarpaOrthologous gene familymany-to-manyPotri.009G022900 Potri.016G047600 Potri.006G191400 ...6
Tree-based ortholog1-to-manyPotri.009G022900 Potri.016G047600 Potri.006G191400 ...6
Anchor pointN/APotri.016G047600 Potri.001G013800 Potri.003G212300 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.001G013800 Potri.003G212300 2
Saccharum spontaneumOrthologous gene familymany-to-manySspon.02G0050370-1C Sspon.06G0001750-2B Sspon.02G0050370-1P ...9
Anchor pointN/ASspon.06G0001750-2B Sspon.06G0001750-1A Sspon.06G0001750-3C ...4
Tree-based ortholog1-to-manySspon.06G0001750-2B Sspon.06G0001750-1A Sspon.06G0001750-4D 3
Best-Hits-and-Inparalogs(BHI)family1-to-manySspon.06G0001750-1A Sspon.06G0001750-4D 2
Selaginella moellendorffiiOrthologous gene familymany-to-manygene31147 gene29901 gene20579 ...6
Tree-based ortholog1-to-manygene31147 gene29901 gene20579 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manygene29313 gene10339 2
Setaria italicaOrthologous gene familymany-to-manySeita.2G160000 Seita.6G114100 Seita.2G254600 ...5
Anchor pointN/ASeita.2G254600 Seita.6G206000 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.6G206000 1
Tree-based ortholog1-to-1Seita.6G206000 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g073960.2 Solyc03g063280.2 Solyc10g044960.1 ...4
Anchor pointN/ASolyc01g073960.2 1
Best-Hits-and-Inparalogs(BHI)family1-to-manySolyc01g073960.2 Solyc10g044960.1 2
Tree-based ortholog1-to-manySolyc01g073960.2 Solyc03g063280.2 Solyc10g044960.1 ...4
Sorghum bicolorOrthologous gene familymany-to-manySobic.002G151600 Sobic.007G209600 Sobic.002G151500 ...5
Anchor pointN/ASobic.007G209600 Sobic.002G248400 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.007G209600 1
Tree-based ortholog1-to-1Sobic.007G209600 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo9G0005900 Spipo10G0020400 Spipo0G0079000 ...4
Anchor pointN/ASpipo10G0020400 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo10G0020400 1
Tree-based ortholog1-to-manySpipo10G0020400 Spipo0G0078900 2
Triticum aestivumOrthologous gene familymany-to-manyTraesCS5A02G266400 TraesCS5D02G177600 TraesCS5A02G173100 ...6
Anchor pointN/ATraesCS5A02G266400 TraesCS5B02G266000 TraesCS5D02G274200 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyTraesCS5A02G266400 TraesCS5B02G266000 TraesCS5D02G274200 3
Tree-based ortholog1-to-manyTraesCS5A02G266400 TraesCS5B02G266000 TraesCS5D02G274200 3
Triticum turgidumOrthologous gene familymany-to-manyTRITD5Bv1G149660 TRITD5Bv1G106690 TRITD5Av1G160020 ...4
Anchor pointN/ATRITD5Bv1G149660 TRITD5Av1G160020 2
Best-Hits-and-Inparalogs(BHI)family1-to-1TRITD5Bv1G149660 1
Tree-based ortholog1-to-manyTRITD5Bv1G149660 TRITD5Av1G160020 2
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01033513001 GSVIVG01001373001 GSVIVG01029959001 ...4
Anchor pointN/AGSVIVG01033513001 GSVIVG01025353001 2
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01033513001 1
Tree-based ortholog1-to-manyGSVIVG01033513001 GSVIVG01001373001 GSVIVG01025353001 3
Zea mays B73Orthologous gene familymany-to-manyZm00001d019922 Zm00001d006030 Zm00001d005106 ...6
Anchor pointN/AZm00001d006030 Zm00001d052893 Zm00001d020946 3
Tree-based ortholog1-to-manyZm00001d006030 Zm00001d020946 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d020946 1
Zea mays B104Orthologous gene familymany-to-manyZm00007a00035264 Zm00007a00009139 Zm00007a00030446 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00007a00033998 1
Tree-based ortholog1-to-1Zm00007a00033998 1
Zea mays PH207Orthologous gene familymany-to-manyZm00008a009130 Zm00008a039763 Zm00008a008441 ...7
Anchor pointN/AZm00008a009130 Zm00008a028436 Zm00008a018044 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00008a018044 1
Tree-based ortholog1-to-1Zm00008a018044 1
Zostera marinaOrthologous gene familymany-to-manyZosma14g01380 Zosma45g00420 Zosma148g00140 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyZosma14g01380 Zosma148g00140 2
Tree-based ortholog1-to-manyZosma14g01380 Zosma45g00420 Zosma148g00140 3
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00035.1.g00510.1.am.mkhc Zjn_sc00018.1.g01770.1.sm.mkhc Zjn_sc00157.1.g00230.1.am.mkhc 3
Anchor pointN/AZjn_sc00018.1.g01770.1.sm.mkhc 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00018.1.g01770.1.sm.mkhc 1
Tree-based ortholog1-to-1Zjn_sc00018.1.g01770.1.sm.mkhc 1
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