Integrative Orthology Viewer: LOC_Os01g16670 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g16670 LOC_Os07g45310 2
Best-Hits-and-Inparalogs(BHI)familyLOC_Os01g16670 1
Tree-based orthologLOC_Os01g16670 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-1ATR0626G216 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0626G216 1
Tree-based ortholog1-to-1ATR0626G216 1
Ananas comosusOrthologous gene familymany-to-manyAco006283 Aco028329 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco028329 1
Tree-based ortholog1-to-1Aco028329 1
Apostasia shenzhenicaOrthologous gene familymany-to-1ASH_gene13040 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ASH_gene13040 1
Tree-based ortholog1-to-1ASH_gene13040 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT4G13110 AT1G03350 2
Best-Hits-and-Inparalogs(BHI)family1-to-1AT1G03350 1
Tree-based ortholog1-to-1AT1G03350 1
Asparagus officinalisOrthologous gene familymany-to-manyevm.TU.AsparagusV1_07.901.V1.1 evm.TU.AsparagusV1_04.1112.V1.1 evm.TU.AsparagusV1_05.1051.V1.1 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1evm.TU.AsparagusV1_05.1051.V1.1 1
Tree-based ortholog1-to-1evm.TU.AsparagusV1_05.1051.V1.1 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g19540 Bradi2g10200 2
Anchor pointN/ABradi2g10200 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi2g10200 1
Tree-based ortholog1-to-1Bradi2g10200 1
Calamus simplicifoliusOrthologous gene familymany-to-manyCALSI_Maker00004982 CALSI_Maker00015119 CALSI_Maker00026140 ...13
Tree-based ortholog1-to-manyCALSI_Maker00015119 CALSI_Maker00026140 CALSI_Maker00018462 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1CALSI_Maker00038287 1
Cenchrus americanusOrthologous gene familymany-to-manyPgl_GLEAN_10022744 Pgl_GLEAN_10022769 2
Anchor pointN/APgl_GLEAN_10022744 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Pgl_GLEAN_10022744 1
Tree-based ortholog1-to-1Pgl_GLEAN_10022744 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-1Cre06.g284000 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre06.g284000 1
Tree-based ortholog1-to-1Cre06.g284000 1
Elaeis guineensisOrthologous gene familymany-to-manyp5.00_sc00279_p0010 p5.00_sc00056_p0010 2
Best-Hits-and-Inparalogs(BHI)family1-to-1p5.00_sc00279_p0010 1
Tree-based ortholog1-to-1p5.00_sc00279_p0010 1
Hordeum vulgareOrthologous gene familymany-to-manyHORVU2Hr1G024900 HORVU3Hr1G038420 2
Anchor pointN/AHORVU3Hr1G038420 1
Best-Hits-and-Inparalogs(BHI)family1-to-1HORVU3Hr1G038420 1
Tree-based ortholog1-to-1HORVU3Hr1G038420 1
Lolium perenneOrthologous gene familymany-to-manyLP017230 LP035131 2
Best-Hits-and-Inparalogs(BHI)family1-to-1LP017230 1
Tree-based ortholog1-to-1LP017230 1
Marchantia polymorphaOrthologous gene familymany-to-1Mapoly0057s0070 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0057s0070 1
Tree-based ortholog1-to-1Mapoly0057s0070 1
Micromonas commodaOrthologous gene familymany-to-1MCO04G122 1
Best-Hits-and-Inparalogs(BHI)family1-to-1MCO04G122 1
Tree-based ortholog1-to-1MCO04G122 1
Miscanthus sinensisOrthologous gene familymany-to-manyMisin06G108300 Misin03G358000 Misin04G377300 ...4
Anchor pointN/AMisin06G108300 Misin05G126100 2
Tree-based ortholog1-to-manyMisin06G108300 Misin05G126100 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Misin05G126100 1
Musa acuminataOrthologous gene familymany-to-manyMa10_g12650 Ma08_g05860 Ma03_g26040 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyMa10_g12650 Ma08_g05860 Ma03_g19300 3
Tree-based ortholog1-to-manyMa10_g12650 Ma08_g05860 Ma03_g26040 ...4
Oropetium thomaeumOrthologous gene familymany-to-1Oropetium_20150105_10353 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_10353 1
Tree-based ortholog1-to-1Oropetium_20150105_10353 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB07G29850 OB01G21090 2
Anchor pointN/AOB01G21090 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OB01G21090 1
Tree-based ortholog1-to-1OB01G21090 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0714863900.01 OsR498G0100640100.01 2
Anchor pointN/AOsR498G0100640100.01 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0100640100.01 1
Tree-based ortholog1-to-1OsR498G0100640100.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-1PEQU_26440 1
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_26440 1
Tree-based ortholog1-to-1PEQU_26440 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000591G0700 PH01001985G0260 PH01000094G0990 ...4
Anchor pointN/APH01000094G0990 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyPH01000094G0990 PH01000209G0200 2
Tree-based ortholog1-to-manyPH01000094G0990 PH01000209G0200 2
Physcomitrium patensOrthologous gene familymany-to-manyPp3c1_21290 Pp3c2_17090 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c1_21290 Pp3c2_17090 2
Tree-based ortholog1-to-manyPp3c1_21290 Pp3c2_17090 2
Picea abiesOrthologous gene familymany-to-manyPAB00034277 PAB00061050 2
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00034277 1
Tree-based ortholog1-to-1PAB00061050 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.018G079900 Potri.015G050700 Potri.008G199100 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.008G199100 Potri.T137700 Potri.008G199000 ...4
Tree-based ortholog1-to-manyPotri.008G199100 Potri.T137700 Potri.008G199000 ...4
Saccharum spontaneumOrthologous gene familymany-to-manySspon.02G0002080-3C Sspon.02G0002080-2B Sspon.02G0002080-1A ...5
Anchor pointN/ASspon.03G0034880-2D Sspon.03G0034880-1B 2
Best-Hits-and-Inparalogs(BHI)family1-to-manySspon.03G0034880-2D Sspon.03G0034880-1B 2
Tree-based ortholog1-to-manySspon.03G0034880-2D Sspon.03G0034880-1B 2
Selaginella moellendorffiiOrthologous gene familymany-to-manygene17752 gene29678 2
Best-Hits-and-Inparalogs(BHI)family1-to-manygene17752 gene29678 2
Tree-based ortholog1-to-manygene17752 gene29678 2
Setaria italicaOrthologous gene familymany-to-manySeita.2G413500 Seita.5G046200 2
Anchor pointN/ASeita.5G046200 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.5G046200 1
Tree-based ortholog1-to-1Seita.5G046200 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g080340.2 Solyc09g074060.2 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc01g080340.2 1
Tree-based ortholog1-to-1Solyc09g074060.2 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.003G127400 Sobic.002G398800 2
Anchor pointN/ASobic.003G127400 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.003G127400 1
Tree-based ortholog1-to-1Sobic.003G127400 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo6G0009500 Spipo6G0036500 2
Best-Hits-and-Inparalogs(BHI)family1-to-manySpipo6G0009500 Spipo6G0036500 2
Tree-based ortholog1-to-manySpipo6G0009500 Spipo6G0036500 2
Triticum aestivumOrthologous gene familymany-to-manyTraesCS3D02G190300 TraesCS2A02G140100 TraesCS2D02G142900 ...6
Anchor pointN/ATraesCS3D02G190300 TraesCS3A02G186400 TraesCS3B02G215900 3
Best-Hits-and-Inparalogs(BHI)family1-to-manyTraesCS3D02G190300 TraesCS3A02G186400 TraesCS3B02G215900 3
Tree-based ortholog1-to-manyTraesCS3D02G190300 TraesCS3A02G186400 TraesCS3B02G215900 3
Triticum turgidumOrthologous gene familymany-to-manyTRITD2Av1G039590 TRITD2Bv1G052920 TRITD3Bv1G093320 ...4
Anchor pointN/ATRITD3Bv1G093320 TRITD3Av1G091480 2
Tree-based ortholog1-to-manyTRITD3Bv1G093320 TRITD3Av1G091480 2
Best-Hits-and-Inparalogs(BHI)family1-to-1TRITD3Av1G091480 1
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01011067001 GSVIVG01017862001 2
Tree-based ortholog1-to-1GSVIVG01011067001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01017862001 1
Zea mays B73Orthologous gene familymany-to-manyZm00001d019375 Zm00001d015823 Zm00001d022353 ...7
Tree-based ortholog1-to-manyZm00001d019375 Zm00001d015822 Zm00001d040393 ...4
Anchor pointN/AZm00001d040393 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d040393 1
Zea mays B104Orthologous gene familymany-to-manyZm00007a00042930 Zm00007a00038736 Zm00007a00042158 ...10
Tree-based ortholog1-to-manyZm00007a00038736 Zm00007a00034224 Zm00007a00024958 ...5
Anchor pointN/AZm00007a00001330 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00007a00001330 1
Zea mays PH207Orthologous gene familymany-to-manyZm00008a029519 Zm00008a011536 2
Anchor pointN/AZm00008a011536 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00008a011536 1
Tree-based ortholog1-to-1Zm00008a011536 1
Zostera marinaOrthologous gene familymany-to-1Zosma41g00380 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma41g00380 1
Tree-based ortholog1-to-1Zosma41g00380 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00044.1.g03660.1.sm.mk Zjn_sc00001.1.g02130.1.am.mk 2
Anchor pointN/AZjn_sc00026.1.g02650.1.am.mk 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00026.1.g02650.1.am.mk 1
Tree-based ortholog1-to-1Zjn_sc00026.1.g02650.1.am.mk 1
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