Tree Explorer: HOM04x5M000326   top

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Species colored phylogenetic tree with associated protein domains.
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The edited multiple sequence alignment used to infer the phylogenetic tree is only amino acids long

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Protein domain view

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Multiple Sequence Alignment information

Method
muscle
Length
3980
Edited length
95

Outlier/edited gene information

Gene id Status Cause
PEQU_31521 removed too diverged
ATR0681G289 removed partial
TRITD2Av1G186510 removed too diverged
Zm00008a007807 removed partial
Zm00008a026901 removed partial
LOC_Os07g07770 removed partial
CALSI_Maker00015522 removed partial
Zm00008a002888 removed partial
Zm00008a031713 removed partial
OsR498G0409540400.01 removed too diverged
CALSI_Maker00045044 removed partial
OsR498G0715014400.01 removed partial
Zm00007a00025723 removed partial
OsR498G0408603800.01 removed too diverged
Zm00001d018913 removed partial
CALSI_Maker00037004 removed partial
Ma06_g27220 removed too diverged
PAB00033104 removed too diverged
Zm00008a026902 removed partial
CALSI_Maker00007316 removed partial
TRITD2Bv1G152290 removed too diverged
OsR498G0715014600.01 removed partial
MisinT399000 removed partial
PEQU_31524 removed partial
HORVU2Hr1G075900 removed too diverged
Sobic.003G008400 removed partial
PAB00014499 removed partial
CALSI_Maker00005208 removed partial
Seita.2G055700 removed partial
Potri.002G064632 removed partial
Zjn_sc00030.1.g02990.1.sm.mkhc removed partial
HORVU4Hr1G056300 removed partial
Zm00001d018914 removed partial
Sspon.01G0048640-3D removed partial
PH01001808G0050 removed partial
CALSI_Maker00043959 removed outlier
TRITD7Av1G211640 removed outlier
CALSI_Maker00034874 removed outlier
Misin04G047800 removed outlier
Solyc06g082040.1 removed outlier
ASH_gene6928 removed outlier
Zm00007a00027869 removed outlier
CALSI_Maker00023680 removed outlier
Zm00007a00006269 removed outlier
CALSI_Maker00023248 removed outlier
CALSI_Maker00026105 removed outlier
Zosma1g02740 removed outlier
CALSI_Maker00034267 removed outlier
ATR0724G009 removed outlier
PEQU_14241 removed outlier
p5.00_sc00331_p0005 removed outlier
PEQU_14240 removed outlier
Spipo16G0023500 removed outlier
HORVU5Hr1G033630 removed outlier
Zjn_sc00013.1.g04215.1.br removed outlier
CALSI_Maker00043953 removed outlier
CALSI_Maker00022513 removed outlier
Oropetium_20150105_27367 removed outlier
Zjn_sc00058.1.g02390.1.am.mk removed outlier
PAB00033681 removed outlier
HORVU5Hr1G097250 removed outlier
Sobic.002G035300 removed outlier
evm.TU.AsparagusV1_08.3415.V1.1 removed outlier
Zjn_sc00030.1.g03010.1.sm.mkhc removed outlier
CALSI_Maker00008749 removed outlier
PEQU_14238 removed outlier
Ma10_g03340 removed outlier
Zjn_sc00013.1.g04220.1.sm.mkhc removed outlier
ATR0684G027 removed outlier
Ma06_g34550 removed outlier
Ma08_g02570 removed outlier
Potri.002G064566 removed outlier
p5.00_sc00435_p0004 removed outlier
CALSI_Maker00026827 removed outlier
Zjn_sc00014.1.g04035.1.br removed outlier
CALSI_Maker00023268 removed outlier
Sspon.02G0042010-1B removed outlier
Pgl_GLEAN_10023456 removed outlier
Sspon.05G0011170-1T removed outlier
Sspon.02G0023690-4D removed outlier
Misin03G041100 removed outlier
Cre12.g516150 removed outlier
Zm00008a023865 removed outlier
ATR1131G060 removed outlier
PEQU_25105 removed outlier
Pgl_GLEAN_10016135 removed outlier
Potri.003G081300 removed outlier