Tree Explorer: HOM04x5M000091   top

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Species colored phylogenetic tree with associated protein domains.
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The edited multiple sequence alignment used to infer the phylogenetic tree is only amino acids long

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Multiple Sequence Alignment information

Method
muscle
Length
2491
Edited length
55

Outlier/edited gene information

Gene id Status Cause
Oropetium_20150105_15019 removed too diverged
Misin06G303800 removed partial
Zosma515g00050 removed partial
CALSI_Maker00045461 removed partial
Zjn_sc00080.1.g00170.1.sm.mk removed partial
Misin10G016800 removed partial
Pgl_GLEAN_10015038 removed too diverged
Zm00001d028982 removed partial
Pp3c9_2330 removed too diverged
p5.00_sc00867_p0004 removed partial
Potri.T133600 removed partial
Potri.T062900 removed partial
Ma10_g18730 removed partial
OsR498G1119407500.01 removed partial
Misin03G197000 removed partial
Solyc05g018050.1 removed partial
evm.TU.AsparagusV1_05.403.V1.1 removed too diverged
CALSI_Maker00048392 removed partial
PEQU_15583 removed partial
Oropetium_20150105_15058 removed too diverged
Zjn_sc06054.1.g00010.1.am.mk removed partial
PEQU_16840 removed partial
p5.00_sc00221_p0001 removed partial
Bradi5g16896 removed partial
Zm00008a001347 removed partial
ATR0705G151 removed partial
OsR498G1119419100.01 removed partial
TraesCS4D02G362000 removed partial
PEQU_19424 removed partial
LP001443 removed partial
Sspon.01G0039290-3D removed partial
OB03G28720 removed partial
Bradi4g42920 removed too diverged
MisinT098500 removed partial
CALSI_Maker00038823 removed partial
CALSI_Maker00048466 removed partial
ATR0705G010 removed partial
ATR0629G058 removed partial
PAB00037882 removed partial
AT1G18770 removed partial
Potri.006G164500 removed partial
p5.00_sc00151_p0045 removed partial
Solyc12g008440.1 removed partial
Zosma133g00620 removed partial
TraesCS1D02G099500 removed too diverged
TRITD4Av1G145970 removed partial
LP019186 removed partial
ATR0705G114 removed partial
PEQU_21650 removed partial
Zosma101g00720 removed partial
PAB00038087 removed partial
evm.TU.AsparagusV1_04.2014.V1.1 removed outlier
Zjn_sc06829.1.g00010.1.am.mk removed outlier
PAB00031867 removed outlier
ATR0705G098 removed outlier
PEQU_19781 removed outlier
OB11G22000 removed outlier
Zm00001d017465 removed outlier
HORVU4Hr1G073950 removed outlier
PAB00014478 removed outlier
OsR498G0511098600.01 removed outlier
ASH_gene9131 removed outlier
Solyc06g005630.1 removed outlier
ATR0559G280 removed outlier
Potri.014G093500 removed outlier
HORVU4Hr1G018170 removed outlier
Zjn_sc00028.1.g02390.1.sm.mk removed outlier
Zm00007a00002032 removed outlier
Bradi4g42930 removed outlier
ATR0723G090 removed outlier
Oropetium_20150105_01348 removed outlier
PAB00006870 removed outlier
Pp3c14_25422 removed outlier
CALSI_Maker00009382 removed outlier
Potri.007G106600 removed outlier
Seita.7G317700 removed outlier
ATR0579G017 removed outlier
AT1G50350 removed outlier
Sspon.04G0004200-3D removed outlier
PH01000622G0720 removed outlier
OB08G24630 removed outlier
TraesCS1B02G118700 removed outlier
Zm00008a008178 removed outlier
TraesCS1B02G309500 removed outlier
evm.TU.AsparagusV1_03.2336.V1.1 removed outlier
evm.TU.AsparagusV1_02.116.V1.1 removed outlier
CALSI_Maker00028857 removed outlier
PAB00027852 removed outlier
CALSI_Maker00039920 removed outlier
Zm00008a039697 removed outlier
PH01005720G0010 removed outlier
PAB00049672 removed outlier
GSVIVG01029854001 removed outlier
PAB00000292 removed outlier
Misin02G258400 removed outlier
LP037093 removed outlier
AT4G18110 removed outlier
OsR498G1119405200.01 removed outlier
HORVU4Hr1G060170 removed outlier
Pgl_GLEAN_10015630 removed outlier
HORVU5Hr1G051760 removed outlier
PEQU_19422 removed outlier
Aco014687 removed outlier
Misin07G496700 removed outlier
LOC_Os11g18970 removed outlier
ASH_gene11358 removed outlier
Oropetium_20150105_18030 removed outlier
ATR0665G205 removed outlier
Solyc07g016090.1 removed outlier
HORVU1Hr1G021490 removed outlier
CALSI_Maker00003363 removed outlier
Potri.001G070000 removed outlier
Pgl_GLEAN_10016362 removed outlier
Potri.007G084600 removed outlier
Zm00008a035605 removed outlier
TraesCS1A02G090900 removed outlier
TRITD1Bv1G169150 removed outlier
Zm00007a00051189 removed outlier
GSVIVG01035510001 removed outlier
GSVIVG01009934001 removed outlier
Oropetium_20150105_18604 removed outlier
PAB00066515 removed outlier
Bradi1g25053 removed outlier
PAB00004500 removed outlier
Zm00008a023007 removed outlier
Pgl_GLEAN_10015042 removed outlier
evm.TU.AsparagusV1_08.3546.V1.1 removed outlier
Zjn_sc00031.1.g00880.1.sm.mk removed outlier
PH01004063G0040 removed outlier
PAB00040672 removed outlier
MCO11G130 removed outlier
ATR0326G058 removed outlier
PAB00002944 removed outlier
PAB00020604 removed outlier
Zjn_sc00003.1.g05170.1.sm.mkhc removed outlier
TraesCS5D02G096500 removed outlier
OsR498G0204833100.01 removed outlier
Spipo17G0038700 removed outlier
CALSI_Maker00008710 removed outlier
Solyc09g059120.1 removed outlier
CALSI_Maker00011132 removed outlier
Pgl_GLEAN_10038151 removed outlier
Aco001205 removed outlier
ATR0099G001 removed outlier
LP026688 removed outlier
OB09G18630 removed outlier
OsR498G1220909300.01 removed outlier
Oropetium_20150105_15094 removed outlier
Sspon.04G0021920-1B removed outlier
Mapoly0030s0046 removed outlier
CALSI_Maker00010362 removed outlier
Pgl_GLEAN_10006716 removed outlier
Zm00008a001065 removed outlier
evm.TU.AsparagusV1_06.1766.V1.1 removed outlier
Solyc01g016450.1 removed outlier
Pp3c1_5780 removed outlier
OsR498G1018086100.01 removed outlier
Solyc05g007900.2 removed outlier
PEQU_02723 removed outlier
LP020631 removed outlier
CALSI_Maker00019569 removed outlier
PH01006038G0030 removed outlier
CALSI_Maker00048373 removed outlier
TraesCS4A02G096000 removed outlier
HORVU6Hr1G068250 removed outlier
PAB00040935 removed outlier
OB0180G10010 removed outlier
LOC_Os10g03920 removed outlier
GSVIVG01029345001 removed outlier
Seita.7G063000 removed outlier
PAB00058553 removed outlier
Sspon.04G0004200-1P removed outlier
Oropetium_20150105_18452 removed outlier