Tree Explorer: HOM04x5M000086   top

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Species colored phylogenetic tree with associated protein domains.
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The edited multiple sequence alignment used to infer the phylogenetic tree is only amino acids long

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Multiple Sequence Alignment information

Method
muscle
Length
2055
Edited length
54

Outlier/edited gene information

Gene id Status Cause
PAB00049477 removed partial
CALSI_Maker00014119 removed partial
TRITD1Av1G208740 removed partial
Potri.007G023800 removed partial
Solyc01g109690.1 removed partial
TraesCS1B02G435500 removed partial
PAB00012011 removed partial
TraesCS1A02G405400 removed partial
Aco016401 removed partial
LP034695 removed partial
LOC_Os07g26150 removed partial
evm.TU.AsparagusV1_05.1230.V1.1 removed partial
Zjn_sc00003.1.g06200.1.sm.mk removed partial
Ma02_g10880 removed partial
TRITD1Bv1G216140 removed partial
Ma04_g14910 removed partial
Potri.007G025100 removed partial
Zm00001d008198 removed too diverged
Seita.4G148800 removed partial
CALSI_Maker00023592 removed partial
TRITD3Av1G161750 removed partial
Zosma108g00010 removed partial
Zosma195g00150 removed partial
TraesCS3A02G240900 removed partial
PAB00046677 removed partial
TRITD3Bv1G018840 removed partial
PAB00042591 removed partial
TRITD1Bv1G216030 removed partial
Ma04_g14900 removed partial
TRITD7Av1G085220 removed too diverged
PEQU_25415 removed partial
Misin08G256300 removed partial
TRITD3Av1G277710 removed partial
GSVIVG01018944001 removed partial
Bradi1g01030 removed partial
Ma06_g28990 removed partial
AT2G18328 removed partial
evm.TU.AsparagusV1_01.3638.V1.1 removed partial
Misin05G201000 removed partial
Aco012769 removed partial
CALSI_Maker00014121 removed partial
Zosma223g00510 removed partial
TraesCS7A02G233100 removed too diverged
TRITD7Bv1G059580 removed partial
TraesCS1D02G413400 removed partial
TraesCS7B02G131500 removed partial
Sspon.01G0006690-2C removed partial
TRITD1Bv1G216070 removed partial
Ma01_g21360 removed partial
TraesCS7B02G131600 removed partial
Seita.9G467400 removed too diverged
Zm00001d025685 removed too diverged
AT4G36570 removed partial
PAB00040777 removed partial
Sspon.01G0006690-1A removed partial
Zjn_sc02281.1.g00010.1.am.mk removed outlier
ASH_gene6054 removed outlier
PAB00025939 removed outlier
PAB00032292 removed outlier
Potri.010G039400 removed outlier
Sspon.07G0026520-1B removed outlier
ATR0618G141 removed outlier
PH01102878G0010 removed outlier
Zjn_sc00073.1.g00630.1.sm.mk removed outlier
Zm00007a00029069 removed outlier
TraesCS1B02G434900 removed outlier
HORVU0Hr1G018970 removed outlier
PEQU_39552 removed outlier
Sspon.08G0029580-1D removed outlier
PAB00012335 removed outlier
Solyc01g109670.2 removed outlier
Potri.002G177000 removed outlier
Misin16G027500 removed outlier
AT3G10585 removed outlier
OB08G12930 removed outlier
Pgl_GLEAN_10014494 removed outlier
Zm00007a00029607 removed outlier
Zjn_sc03347.1.g00010.1.sm.mk removed outlier
AT3G10595 removed outlier
TRITD3Bv1G258270 removed outlier
Aco029730 removed outlier
Oropetium_20150105_19405 removed outlier
evm.TU.AsparagusV1_07.1420.V1.1 removed outlier
Zjn_sc00641.1.g00010.1.sm.mkhc removed outlier
Solyc09g007600.1 removed outlier
Sspon.08G0021340-1B removed outlier
ATR0705G019 removed outlier
Zm00007a00017224 removed outlier
p5.00_sc00013_p0022 removed outlier
Solyc05g014570.1 removed outlier
p5.00_sc00102_p0005 removed outlier
Oropetium_20150105_20031 removed outlier
PAB00037972 removed outlier
Zm00007a00048865 removed outlier
Oropetium_20150105_25462 removed outlier
Pgl_GLEAN_10029450 removed outlier
Sspon.03G0041600-1C removed outlier
Zm00001d026613 removed outlier
Aco013653 removed outlier
TRITD7Av1G040280 removed outlier
Zm00001d024628 removed outlier
OB05G33650 removed outlier
p5.00_sc00001_p0144 removed outlier
evm.TU.AsparagusV1_04.758.V1.1 removed outlier
Sobic.001G006300 removed outlier
Oropetium_20150105_23361 removed outlier
Solyc11g017360.1 removed outlier
AT5G47290 removed outlier
PEQU_38105 removed outlier
CALSI_Maker00046763 removed outlier
ATR0593G001 removed outlier
Zjn_sc00095.1.g01020.1.sm.mkhc removed outlier
HORVU2Hr1G047720 removed outlier
Sspon.01G0033450-1A removed outlier
Sspon.08G0010230-1A removed outlier
Zm00007a00042748 removed outlier
OsR498G0611705800.01 removed outlier
ATR0820G071 removed outlier
Zm00001d025686 removed outlier
Sspon.07G0026560-1P removed outlier
Zjn_sc08504.1.g00010.1.am.mk removed outlier
Sspon.08G0013550-2B removed outlier
Aco015639 removed outlier
LOC_Os06g07750 removed outlier
TraesCS7A02G135600 removed outlier
Zm00001d008808 removed outlier
ATR0705G032 removed outlier
Zm00008a035681 removed outlier
PAB00058613 removed outlier
Zm00008a026475 removed outlier
Sspon.01G0039930-2D removed outlier