Overview Functional Clusters: Musa acuminata top

Overview

Data

Cluster id E-value Cluster size Chromosome Identifier GO Type Description
CH_mac_1 7.31803e-64 27 chr10 GO:0000963 BP mitochondrial RNA processing
CH_mac_2 2.62124e-31 13 chr07 GO:0010333 MF terpene synthase activity
CH_mac_3 1.38405e-29 11 chr07 GO:0019010 MF farnesoic acid O-methyltransferase activity
CH_mac_4 3.50997e-25 15 chr02 GO:0008171 MF O-methyltransferase activity
CH_mac_5 9.54196e-23 7 chr04 GO:0016139 BP glycoside catabolic process
CH_mac_6 1.57361e-22 12 chr03 GO:0043531 MF ADP binding
CH_mac_7 1.12762e-20 19 chr10 GO:0003690 MF double-stranded DNA binding
CH_mac_8 3.38292e-20 12 chr03 GO:0043531 MF ADP binding
CH_mac_9 5.37565e-20 9 chr07 GO:0010333 MF terpene synthase activity
CH_mac_10 3.73165e-19 6 chr08 GO:0004506 MF squalene monooxygenase activity
CH_mac_11 2.61195e-18 6 chr08 GO:0050162 MF oxalate oxidase activity
CH_mac_12 3.03767e-17 10 chr09 GO:0030246 MF carbohydrate binding
CH_mac_13 8.6186e-17 6 chr04 GO:0052578 MF alpha-farnesene synthase activity
CH_mac_14 1.16055e-16 10 chr03 GO:0004252 MF serine-type endopeptidase activity
CH_mac_15 3.32412e-16 11 chr04 GO:0003690 MF double-stranded DNA binding
CH_mac_16 7.06393e-16 9 chr10 GO:0043531 MF ADP binding
CH_mac_17 0.00000000000000951056 7 chr05 GO:0030145 MF manganese ion binding
CH_mac_18 0.00000000000000985043 5 chr04 GO:0090411 MF brassinosteroid binding
CH_mac_19 0.0000000000000196981 5 chr09 GO:0046256 BP 2,4,6-trinitrotoluene catabolic process
CH_mac_20 0.0000000000000315941 7 chr03 GO:0030247 MF polysaccharide binding
CH_mac_21 0.0000000000000361182 5 chr09 GO:0033897 MF ribonuclease T2 activity
CH_mac_22 0.000000000000252187 7 chr01 GO:0030247 MF polysaccharide binding
CH_mac_23 0.000000000000909054 5 chr10 GO:0080037 BP negative regulation of cytokinin-activated signaling pathway
CH_mac_24 0.00000000000140824 5 chr10 GO:0016884 MF carbon-nitrogen ligase activity, with glutamine as amido-N-donor
CH_mac_25 0.00000000000987969 15 chr04 GO:0042445 BP hormone metabolic process
CH_mac_26 0.0000000000103329 7 chr02 GO:0030247 MF polysaccharide binding
CH_mac_27 0.0000000000145513 15 chr05 GO:0006468 BP protein phosphorylation
CH_mac_28 0.0000000000302206 6 chr10 GO:0042393 MF histone binding
CH_mac_29 0.000000000035883 8 mito3 GO:0098798 CC mitochondrial protein complex
CH_mac_30 0.0000000000412714 4 chr09 GO:0080019 MF fatty-acyl-CoA reductase (alcohol-forming) activity
CH_mac_31 0.000000000115569 4 chr08 GO:0004097 MF catechol oxidase activity
CH_mac_32 0.000000000174052 6 chr09 GO:0008171 MF O-methyltransferase activity
CH_mac_33 0.000000000271963 5 chr07 GO:0010333 MF terpene synthase activity
CH_mac_34 0.000000000288857 4 chr01 GO:0000055 BP ribosomal large subunit export from nucleus
CH_mac_35 0.00000000032734 5 chr04 GO:0048544 BP recognition of pollen
CH_mac_36 0.000000000549501 5 chr02 GO:0071949 MF FAD binding
CH_mac_37 0.00000000103093 6 chr04 GO:0030247 MF polysaccharide binding
CH_mac_38 0.00000000213306 4 chr07 GO:0004565 MF beta-galactosidase activity
CH_mac_39 0.00000000213306 4 chr08 GO:0009678 MF hydrogen-translocating pyrophosphatase activity
CH_mac_40 0.00000000234527 5 chr04 GO:0006418 BP tRNA aminoacylation for protein translation
CH_mac_41 0.00000000266633 4 chr01 GO:1900457 BP regulation of brassinosteroid mediated signaling pathway
CH_mac_42 0.00000000266854 6 chr09 GO:0002237 BP response to molecule of bacterial origin
CH_mac_43 0.00000000320458 7 chr03 GO:0005506 MF iron ion binding
CH_mac_44 0.0000000058995 4 chr04 GO:1901957 BP regulation of cutin biosynthetic process
CH_mac_45 0.0000000135936 5 chr03 GO:0042626 MF ATPase-coupled transmembrane transporter activity
CH_mac_46 0.0000000181457 7 chr01 GO:0016747 MF transferase activity, transferring acyl groups other than amino-acyl groups
CH_mac_47 0.0000000193698 3 chr11 GO:0052636 MF arabinosyltransferase activity
CH_mac_48 0.0000000193704 3 chr04 GO:0080066 MF 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity
CH_mac_49 0.0000000225194 4 chr08 GO:0016760 MF cellulose synthase (UDP-forming) activity
CH_mac_50 0.0000000234578 6 chr01 GO:0004540 MF ribonuclease activity
CH_mac_51 0.0000000256926 5 chr03 GO:0004190 MF aspartic-type endopeptidase activity
CH_mac_52 0.0000000363463 4 chr01 GO:0006857 BP oligopeptide transport
CH_mac_53 0.0000000447084 5 chr02 GO:0042743 BP hydrogen peroxide metabolic process
CH_mac_54 0.000000048426 3 chr06 GO:0080002 MF UDP-glucose:4-aminobenzoate acylglucosyltransferase activity
CH_mac_55 0.000000048426 3 chr08 GO:0000293 MF ferric-chelate reductase activity
CH_mac_56 0.000000048426 3 chr09 GO:0110128 BP phloem sucrose unloading
CH_mac_57 0.0000000968519 3 chr04 GO:0006376 BP mRNA splice site selection
CH_mac_58 0.000000174041 4 chr01 GO:0003899 MF DNA-directed 5'-3' RNA polymerase activity
CH_mac_59 0.000000179001 5 chr08 GO:0004857 MF enzyme inhibitor activity
CH_mac_60 0.00000019369 3 chr03 GO:0050268 MF coniferyl-alcohol dehydrogenase activity
CH_mac_61 0.000000217384 4 chr06 GO:0008234 MF cysteine-type peptidase activity
CH_mac_62 0.00000022592 4 chr08 GO:0010726 BP positive regulation of hydrogen peroxide metabolic process
CH_mac_63 0.000000271185 3 chr05 GO:0003844 MF 1,4-alpha-glucan branching enzyme activity
CH_mac_64 0.000000271185 3 chr06 GO:0010493 BP Lewis a epitope biosynthetic process
CH_mac_65 0.000000352905 4 chr09 GO:0006261 BP DNA-dependent DNA replication
CH_mac_66 0.00000038735 3 chr09 GO:0042735 CC protein body
CH_mac_67 0.000000396631 4 chr03 GO:0030599 MF pectinesterase activity
CH_mac_68 0.000000406778 3 chr09 GO:1902289 BP negative regulation of defense response to oomycetes
CH_mac_69 0.000000490301 4 chr10 GO:0009765 BP photosynthesis, light harvesting
CH_mac_70 0.000000581112 3 chr05 GO:0045300 MF acyl-[acyl-carrier-protein] desaturase activity
CH_mac_71 0.000000677886 3 chr02 GO:0010266 BP response to vitamin B1
CH_mac_72 0.000000686879 4 chr03 GO:0015299 MF solute:proton antiporter activity
CH_mac_73 0.00000106537 3 chr03 GO:0009871 BP jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway
CH_mac_74 0.00000106537 3 chr01 GO:0000062 MF fatty-acyl-CoA binding
CH_mac_75 0.0000010846 3 chr07 GO:0019310 BP inositol catabolic process
CH_mac_76 0.00000146942 4 chr05 GO:0009787 BP regulation of abscisic acid-activated signaling pathway
CH_mac_77 0.00000160681 4 chr01 GO:0000786 CC nucleosome
CH_mac_78 0.00000162686 3 chr04 GO:0004556 MF alpha-amylase activity
CH_mac_79 0.00000169443 3 chr04 GO:0032955 BP regulation of division septum assembly
CH_mac_80 0.00000176271 3 chr07 GO:0008107 MF galactoside 2-alpha-L-fucosyltransferase activity
CH_mac_81 0.0000019803 4 chr08 GO:0030599 MF pectinesterase activity
CH_mac_82 0.00000198852 5 chr10 GO:0016747 MF transferase activity, transferring acyl groups other than amino-acyl groups
CH_mac_83 0.00000198852 5 chr06 GO:0016747 MF transferase activity, transferring acyl groups other than amino-acyl groups
CH_mac_84 0.00000232146 6 chr01 GO:0016757 MF transferase activity, transferring glycosyl groups
CH_mac_85 0.00000271185 3 chr02 GO:0004869 MF cysteine-type endopeptidase inhibitor activity
CH_mac_86 0.00000312739 5 chr11 GO:0004252 MF serine-type endopeptidase activity
CH_mac_87 0.00000319548 3 chr07 GO:0016045 BP detection of bacterium
CH_mac_88 0.00000329297 3 chr09 GO:0003950 MF NAD+ ADP-ribosyltransferase activity
CH_mac_89 0.00000393912 5 chr02 GO:0005506 MF iron ion binding
CH_mac_90 0.00000401491 4 chr06 GO:0016702 MF oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
CH_mac_91 0.00000425958 3 chr08 GO:0008987 MF quinolinate synthetase A activity
CH_mac_92 0.00000427777 5 chr06 GO:0004601 MF peroxidase activity
CH_mac_93 0.00000552056 3 chr10 GO:0008360 BP regulation of cell shape
CH_mac_94 0.00000758034 4 chr01 GO:0048544 BP recognition of pollen
CH_mac_95 0.00000796226 5 chr05 GO:0004540 MF ribonuclease activity
CH_mac_96 0.00000857624 3 chr04 GO:0004012 MF ATPase-coupled phospholipid transporter activity
CH_mac_97 0.00000895364 5 chr06 GO:0002213 BP defense response to insect
CH_mac_98 0.00000946625 5 chr03 GO:0009505 CC plant-type cell wall
CH_mac_99 0.0000101279 7 chr08 GO:0030246 MF carbohydrate binding
CH_mac_100 0.0000118429 5 chr08 GO:0016747 MF transferase activity, transferring acyl groups other than amino-acyl groups
CH_mac_101 0.0000134056 4 chr08 GO:0042254 BP ribosome biogenesis
CH_mac_102 0.0000167893 4 chr02 GO:0004601 MF peroxidase activity
CH_mac_103 0.0000189727 5 chr01 GO:0004553 MF hydrolase activity, hydrolyzing O-glycosyl compounds
CH_mac_104 0.0000200764 4 chr04 GO:0002239 BP response to oomycetes
CH_mac_105 0.0000213969 5 chr02 GO:0016758 MF transferase activity, transferring hexosyl groups
CH_mac_106 0.0000214027 6 chr08 GO:0004553 MF hydrolase activity, hydrolyzing O-glycosyl compounds
CH_mac_107 0.0000264212 3 chr08 GO:0030955 MF potassium ion binding
CH_mac_108 0.0000264212 3 chr05 GO:0030955 MF potassium ion binding
CH_mac_109 0.0000273063 4 chr01 GO:0030247 MF polysaccharide binding
CH_mac_110 0.0000345761 3 chr07 GO:0005681 CC spliceosomal complex
CH_mac_111 0.0000348867 5 chr01 GO:0000226 BP microtubule cytoskeleton organization
CH_mac_112 0.0000503054 3 chr06 GO:0031219 MF levanase activity
CH_mac_113 0.0000568182 2 chr10 GO:0047513 MF 1,2-alpha-L-fucosidase activity
CH_mac_114 0.0000568182 2 chr09 GO:1905775 BP negative regulation of DNA helicase activity
CH_mac_115 0.0000568182 2 chr02 GO:0031297 BP replication fork processing
CH_mac_116 0.0000568182 2 chr06 GO:0010409 BP extensin metabolic process
CH_mac_117 0.0000568182 2 chr03 GO:0051070 BP galactomannan biosynthetic process
CH_mac_118 0.0000568182 2 chr02 GO:0039694 BP viral RNA genome replication
CH_mac_119 0.0000568182 2 chr09 GO:0004399 MF histidinol dehydrogenase activity
CH_mac_120 0.0000568182 2 chr01 GO:0051749 MF indole acetic acid carboxyl methyltransferase activity
CH_mac_121 0.0000568182 2 chr02 GO:0003721 MF telomerase RNA reverse transcriptase activity
CH_mac_122 0.0000568182 2 chr07 GO:0046522 MF S-methyl-5-thioribose kinase activity
CH_mac_123 0.0000568182 2 chr05 GO:0018738 MF S-formylglutathione hydrolase activity
CH_mac_124 0.0000568182 2 chr06 GO:0033925 MF mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
CH_mac_125 0.0000568182 2 chr05 GO:0090408 BP phloem nitrate loading
CH_mac_126 0.0000568182 2 chr01 GO:0060416 BP response to growth hormone
CH_mac_127 0.0000568182 2 chr05 GO:0080014 MF thalianol hydroxylase activity
CH_mac_128 0.0000568182 2 chr08 GO:0009905 MF ent-copalyl diphosphate synthase activity
CH_mac_129 0.0000568182 2 chr07 GO:0000407 CC phagophore assembly site
CH_mac_130 0.0000568182 2 chr04 GO:0007292 BP female gamete generation
CH_mac_131 0.0000568182 2 chr09 GO:0045876 BP positive regulation of sister chromatid cohesion
CH_mac_132 0.0000568182 2 chr06 GO:0009992 BP cellular water homeostasis
CH_mac_133 0.0000568182 2 chr07 GO:0050982 BP detection of mechanical stimulus
CH_mac_134 0.0000582442 4 chr11 GO:0010150 BP leaf senescence
CH_mac_135 0.0000644977 6 chr06 GO:0005506 MF iron ion binding
CH_mac_136 0.0000813245 5 chr10 GO:0005506 MF iron ion binding
CH_mac_137 0.0000937576 10 chr08 GO:0055114 BP oxidation-reduction process
CH_mac_138 0.000103978 4 chr02 GO:0031225 CC anchored component of membrane
CH_mac_139 0.000109176 10 chr09 GO:0009845 BP seed germination
CH_mac_140 0.000110282 3 chrUn_random GO:1904668 BP positive regulation of ubiquitin protein ligase activity
CH_mac_141 0.00011189 6 chr05 GO:0005506 MF iron ion binding
CH_mac_142 0.000126852 5 chr10 GO:0016758 MF transferase activity, transferring hexosyl groups
CH_mac_143 0.000127046 3 chr04 GO:0008375 MF acetylglucosaminyltransferase activity
CH_mac_144 0.000127046 3 chr06 GO:0010333 MF terpene synthase activity
CH_mac_145 0.000137942 4 chr01 GO:0030246 MF carbohydrate binding
CH_mac_146 0.000141694 3 chr07 GO:0048544 BP recognition of pollen
CH_mac_147 0.000164657 11 chr08 GO:0016788 MF hydrolase activity, acting on ester bonds
CH_mac_148 0.000165066 4 chr08 GO:0045735 MF nutrient reservoir activity
CH_mac_149 0.00017045 2 chr09 GO:0010293 MF abscisic aldehyde oxidase activity
CH_mac_150 0.00017045 2 chr05 GO:0033971 MF hydroxyisourate hydrolase activity
CH_mac_151 0.000170455 2 chr05 GO:0034427 BP nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
CH_mac_152 0.000170455 2 chr09 GO:0019237 MF centromeric DNA binding
CH_mac_153 0.000170455 2 chr10 GO:0006422 BP aspartyl-tRNA aminoacylation
CH_mac_154 0.000170455 2 chr08 GO:1990570 BP GDP-mannose transmembrane transport
CH_mac_155 0.000170455 2 chr02 GO:0016480 BP negative regulation of transcription by RNA polymerase III
CH_mac_156 0.000170455 2 chr01 GO:0018279 BP protein N-linked glycosylation via asparagine
CH_mac_157 0.000170455 2 chr07 GO:0004459 MF L-lactate dehydrogenase activity
CH_mac_158 0.000170455 2 chr07 GO:0004764 MF shikimate 3-dehydrogenase (NADP+) activity
CH_mac_159 0.000170455 2 chr10 GO:0045431 MF flavonol synthase activity
CH_mac_160 0.000170455 2 chr06 GO:0004073 MF aspartate-semialdehyde dehydrogenase activity
CH_mac_161 0.000170455 2 chr04 GO:0000829 MF inositol heptakisphosphate kinase activity
CH_mac_162 0.000170455 2 chr06 GO:0004076 MF biotin synthase activity
CH_mac_163 0.000170455 2 chr03 GO:0004061 MF arylformamidase activity
CH_mac_164 0.000170455 2 chr03 GO:0010298 MF dihydrocamalexic acid decarboxylase activity
CH_mac_165 0.000170455 2 chr11 GO:0004657 MF proline dehydrogenase activity
CH_mac_166 0.000170455 2 chr05 GO:0006344 BP maintenance of chromatin silencing
CH_mac_167 0.000170455 2 chr05 GO:0010273 BP detoxification of copper ion
CH_mac_168 0.000197378 4 chr01 GO:0009644 BP response to high light intensity
CH_mac_169 0.000211342 9 chr03 GO:0009737 BP response to abscisic acid
CH_mac_170 0.000217509 5 chr02 GO:0005576 CC extracellular region
CH_mac_171 0.000238839 3 chr05 GO:0009269 BP response to desiccation
CH_mac_172 0.000261917 9 chr11 GO:0016491 MF oxidoreductase activity
CH_mac_173 0.000304035 3 chr09 GO:0009772 BP photosynthetic electron transport in photosystem II
CH_mac_174 0.000320229 7 chr06 GO:0009698 BP phenylpropanoid metabolic process
CH_mac_175 0.00034089 2 chr05 GO:0050017 MF L-3-cyanoalanine synthase activity
CH_mac_176 0.000340909 2 chr10 GO:0050403 MF trans-zeatin O-beta-D-glucosyltransferase activity
CH_mac_177 0.000340909 2 chr08 GO:0008309 MF double-stranded DNA exodeoxyribonuclease activity
CH_mac_178 0.000340909 2 chr06 GO:0004665 MF prephenate dehydrogenase (NADP+) activity
CH_mac_179 0.000340909 2 chr02 GO:0016629 MF 12-oxophytodienoate reductase activity
CH_mac_180 0.000340909 2 chr09 GO:0004150 MF dihydroneopterin aldolase activity
CH_mac_181 0.000340909 2 chr02 GO:0005655 CC nucleolar ribonuclease P complex
CH_mac_182 0.000340909 2 chr11 GO:0030418 BP nicotianamine biosynthetic process
CH_mac_183 0.000340909 2 chr05 GO:0072722 BP response to amitrole
CH_mac_184 0.000340909 2 chr01 GO:0005513 BP detection of calcium ion
CH_mac_185 0.000340909 2 chr05 GO:0080162 BP intracellular auxin transport
CH_mac_186 0.000340909 2 chr09 GO:0098599 MF palmitoyl hydrolase activity
CH_mac_187 0.000354923 9 chr08 GO:0005975 BP carbohydrate metabolic process
CH_mac_188 0.000402964 3 chr01 GO:0015299 MF solute:proton antiporter activity
CH_mac_189 0.000412073 4 chr02 GO:0006364 BP rRNA processing
CH_mac_190 0.000443409 4 chrUn_random GO:0015074 BP DNA integration
CH_mac_191 0.000444943 3 chr09 GO:0051259 BP protein complex oligomerization
CH_mac_192 0.00050281 3 chr04 GO:0004144 MF diacylglycerol O-acyltransferase activity
CH_mac_193 0.000507605 3 chr02 GO:0016620 MF oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
CH_mac_194 0.000511339 2 chr11 GO:0003937 MF IMP cyclohydrolase activity
CH_mac_195 0.000511339 2 chr02 GO:0042351 BP 'de novo' GDP-L-fucose biosynthetic process
CH_mac_196 0.000511339 2 chr05 GO:0006574 BP valine catabolic process
CH_mac_197 0.000568182 2 chr04 GO:0008253 MF 5'-nucleotidase activity
CH_mac_198 0.000568182 2 chr04 GO:0090279 BP regulation of calcium ion import
CH_mac_199 0.000568182 2 chr04 GO:0050736 MF O-malonyltransferase activity
CH_mac_200 0.000568182 2 chr09 GO:0003896 MF DNA primase activity
CH_mac_201 0.000568182 2 chr09 GO:0006007 BP glucose catabolic process
CH_mac_202 0.000568182 2 chr05 GO:0016618 MF hydroxypyruvate reductase activity
CH_mac_203 0.000568182 2 chr03 GO:0004084 MF branched-chain-amino-acid transaminase activity
CH_mac_204 0.000568182 2 chr03 GO:0008460 MF dTDP-glucose 4,6-dehydratase activity
CH_mac_205 0.000568182 2 chr10 GO:0044571 BP [2Fe-2S] cluster assembly
CH_mac_206 0.000568182 2 chr09 GO:0070182 MF DNA polymerase binding
CH_mac_207 0.000568182 2 chr10 GO:0070971 CC endoplasmic reticulum exit site
CH_mac_208 0.000649121 3 chr01 GO:0004190 MF aspartic-type endopeptidase activity
CH_mac_209 0.000677277 4 chr05 GO:0051015 MF actin filament binding
CH_mac_210 0.00069191 3 chr07 GO:0030247 MF polysaccharide binding
CH_mac_211 0.000715325 4 chr02 GO:0019953 BP sexual reproduction
CH_mac_212 0.000761088 6 chr09 GO:0030246 MF carbohydrate binding
CH_mac_213 0.000773048 4 chr10 GO:0003690 MF double-stranded DNA binding
CH_mac_214 0.000852273 2 chr05 GO:0046417 BP chorismate metabolic process
CH_mac_215 0.000852273 2 chr05 GO:0051127 BP positive regulation of actin nucleation
CH_mac_216 0.000852273 2 chr08 GO:0004488 MF methylenetetrahydrofolate dehydrogenase (NADP+) activity
CH_mac_217 0.000852273 2 chr01 GO:0009916 MF alternative oxidase activity
CH_mac_218 0.000852273 2 chr08 GO:0004072 MF aspartate kinase activity
CH_mac_219 0.000852273 2 chr08 GO:0080118 MF brassinosteroid sulfotransferase activity
CH_mac_220 0.000852273 2 chr01 GO:0051499 MF D-aminoacyl-tRNA deacylase activity
CH_mac_221 0.000852273 2 chr03 GO:0004301 MF epoxide hydrolase activity
CH_mac_222 0.000852273 2 mito3 GO:0031361 CC integral component of thylakoid membrane
CH_mac_223 0.000881856 3 chr02 GO:0010182 BP sugar mediated signaling pathway
CH_mac_224 0.000885174 3 chr09 GO:0030599 MF pectinesterase activity
CH_mac_225 0.00089964 4 chr04 GO:0004866 MF endopeptidase inhibitor activity
CH_mac_226 0.000967783 6 chr11 GO:0005506 MF iron ion binding

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 GO Primary GO data only. 2 30 80 0.001 X
2 GO Primary GO data only. 2 30 80 0.001 V
3 GO All GO data. 2 30 80 0.001 X
4 GO All GO data. 2 30 80 0.001 V
5 InterPro No filter applied. 2 30 80 0.001 X
6 InterPro No filter applied. 2 30 80 0.001 V