Functional clusters   top

Information

Type
GO term
Identifier
GO:0010411
Description
xyloglucan metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyonBd11CH_bdi_57440.0000000141233
Brachypodium distachyonBd31CH_bdi_131330.0000186324
Calamus simplicifoliusscaffold4371CH_calsi_49440.0000000185857
Cenchrus americanuschr41CH_cam_69231.36744e-19
Cenchrus americanuschr31CH_cam_62460.0000000824915
Elaeis guineensisEG5.1_Chr81CH_egu_79330.0000350015
Marchantia polymorphascaffold_2031CH_mpo_127110.000000000000315609
Marchantia polymorphascaffold_711CH_mpo_36440.000000211641
Marchantia polymorphascaffold_1491CH_mpo_73330.000119756
Miscanthus sinensisChr181CH_msi_114450.000000097382
Miscanthus sinensisChr111CH_msi_291340.000107533
Miscanthus sinensisChr131CH_msi_292340.000107533
Oryza brachyantha41CH_obr_49450.0000000191276
Oryza brachyantha61CH_obr_55460.0000000573578
Oryza sativa ssp. japonicaChr41CH_osa_139480.00000045723
Oryza sativa ssp. japonicaChr61CH_osa_262350.000110332
Oryza sativa ssp. indicaChr41CH_osaindica_90450.0000000362802
Oryza sativa ssp. indicaChr61CH_osaindica_91450.0000000362802
Oryza sativa ssp. indicaChr81CH_osaindica_1614160.0000131334
Phalaenopsis equestrisScaffold0002631CH_peq_12450.0000000312262
Sorghum bicolorChr071CH_sbi_877720.0000000119328
Sorghum bicolorChr101CH_sbi_105450.0000000952529
Sorghum bicolorChr061CH_sbi_190330.0000232081
Setaria italicascaffold_61CH_sit_179293.6458e-17
Setaria italicascaffold_71CH_sit_95440.0000000184605
Saccharum spontaneumChr6A1CH_ssp_1210211.78693e-19
Saccharum spontaneumChr8A1CH_ssp_31780.00000000000000264279
Saccharum spontaneumChr8B1CH_ssp_48660.000000000000279988
Saccharum spontaneumChr6C1CH_ssp_1166150.00000000138848
Saccharum spontaneumChr6B1CH_ssp_117560.00000000140673
Triticum aestivumchr7A1CH_tae_829167.51318e-18
Triticum aestivumchr7B1CH_tae_222690.0000000000324123
Triticum aestivumchr2D1CH_tae_260550.000000000318777
Triticum aestivumchr2D1CH_tae_329570.00000000668064
Triticum aestivumchr2A1CH_tae_389590.000000040002
Triticum aestivumchr2A1CH_tae_471440.000000260547
Triticum aestivumchr3A1CH_tae_472440.000000260547
Triticum aestivumchr2B1CH_tae_7944100.0000543913
Triticum aestivumchr3B1CH_tae_910330.000211354
Triticum turgidumchr7A1CH_ttu_288115.10834e-18
Triticum turgidumchr2A1CH_ttu_121560.000000000277642
Triticum turgidumchr2B1CH_ttu_419340.000221497
Zoysia japonica ssp. nagirizakiZjn_sc00110.11CH_zjn_275190.0000000131675
Zoysia japonica ssp. nagirizakiZjn_sc00193.11CH_zjn_42490.000000336152
Zea mays B7321CH_zma_118340.0000449358
Zea mays PH207chr101CH_zma-ph207_60470.000000321834
Zea mays PH207chr021CH_zma-ph207_99330.0000140115
Zea mays PH207chr051CH_zma-ph207_129340.0000560169
Marchantia polymorphascaffold_2034CH_mpo_147110.000000000000874172
Marchantia polymorphascaffold_714CH_mpo_44440.000000369401
Marchantia polymorphascaffold_1494CH_mpo_101330.000180777
Saccharum spontaneumChr8B4CH_ssp_3435150.00000214484
Triticum aestivumchr7D4CH_tae_6776320.000000987743
Marchantia polymorphascaffold_2033CH_mpo_147110.000000000000874172
Marchantia polymorphascaffold_713CH_mpo_44440.000000369401
Marchantia polymorphascaffold_1493CH_mpo_101330.000180777
Saccharum spontaneumChr8B3CH_ssp_3435150.00000214484
Triticum aestivumchr7D3CH_tae_6776320.000000987743
Brachypodium distachyonBd12CH_bdi_57440.0000000141233
Brachypodium distachyonBd32CH_bdi_131330.0000186324
Calamus simplicifoliusscaffold4372CH_calsi_49440.0000000185857
Cenchrus americanuschr42CH_cam_69231.36744e-19
Cenchrus americanuschr32CH_cam_62460.0000000824915
Elaeis guineensisEG5.1_Chr82CH_egu_79330.0000350015
Marchantia polymorphascaffold_2032CH_mpo_127110.000000000000315609
Marchantia polymorphascaffold_712CH_mpo_36440.000000211641
Marchantia polymorphascaffold_1492CH_mpo_73330.000119756
Miscanthus sinensisChr182CH_msi_114450.000000097382
Miscanthus sinensisChr112CH_msi_291340.000107533
Miscanthus sinensisChr132CH_msi_292340.000107533
Oryza brachyantha42CH_obr_49450.0000000191276
Oryza brachyantha62CH_obr_55460.0000000573578
Oryza sativa ssp. japonicaChr42CH_osa_139480.00000045723
Oryza sativa ssp. japonicaChr62CH_osa_262350.000110332
Oryza sativa ssp. indicaChr42CH_osaindica_90450.0000000362802
Oryza sativa ssp. indicaChr62CH_osaindica_91450.0000000362802
Oryza sativa ssp. indicaChr82CH_osaindica_1614160.0000131334
Phalaenopsis equestrisScaffold0002632CH_peq_12450.0000000312262
Sorghum bicolorChr072CH_sbi_877720.0000000119328
Sorghum bicolorChr102CH_sbi_105450.0000000952529
Sorghum bicolorChr062CH_sbi_190330.0000232081
Setaria italicascaffold_62CH_sit_179293.6458e-17
Setaria italicascaffold_72CH_sit_95440.0000000184605
Saccharum spontaneumChr6A2CH_ssp_1210211.78693e-19
Saccharum spontaneumChr8A2CH_ssp_31780.00000000000000264279
Saccharum spontaneumChr8B2CH_ssp_48660.000000000000279988
Saccharum spontaneumChr6C2CH_ssp_1166150.00000000138848
Saccharum spontaneumChr6B2CH_ssp_117560.00000000140673
Triticum aestivumchr7A2CH_tae_829167.51318e-18
Triticum aestivumchr7B2CH_tae_222690.0000000000324123
Triticum aestivumchr2D2CH_tae_260550.000000000318777
Triticum aestivumchr2D2CH_tae_329570.00000000668064
Triticum aestivumchr2A2CH_tae_389590.000000040002
Triticum aestivumchr2A2CH_tae_471440.000000260547
Triticum aestivumchr3A2CH_tae_472440.000000260547
Triticum aestivumchr2B2CH_tae_7944100.0000543913
Triticum aestivumchr3B2CH_tae_910330.000211354
Triticum turgidumchr7A2CH_ttu_288115.10834e-18
Triticum turgidumchr2A2CH_ttu_121560.000000000277642
Triticum turgidumchr2B2CH_ttu_419340.000221497
Zoysia japonica ssp. nagirizakiZjn_sc00110.12CH_zjn_275190.0000000131675
Zoysia japonica ssp. nagirizakiZjn_sc00193.12CH_zjn_42490.000000336152
Zea mays B7322CH_zma_118340.0000449358
Zea mays PH207chr102CH_zma-ph207_60470.000000321834
Zea mays PH207chr022CH_zma-ph207_99330.0000140115
Zea mays PH207chr052CH_zma-ph207_129340.0000560169

Available child term results

Ontology identifier Description Number of clusters
GO:0009969 xyloglucan biosynthetic process 28

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 GO Primary GO data only. 2 30 80 0.001 X
2 GO Primary GO data only. 2 30 80 0.001 V
3 GO All GO data. 2 30 80 0.001 X
4 GO All GO data. 2 30 80 0.001 V
5 InterPro No filter applied. 2 30 80 0.001 X
6 InterPro No filter applied. 2 30 80 0.001 V