Interactive Phylogenetics Module

Gene Id
p5.00_sc00074_p0086

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
p5.00_sc00074_p0086 Elaeis guineensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 3452.1 1816 100.0
p5.00_sc00199_p0017 Elaeis guineensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 2447.9 1774 75.9
Ma01_g14420 Musa acuminata HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1705.6 1815 57.0
Ma11_g11890 Musa acuminata HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1636.3 1786 54.9
evm.TU.AsparagusV1_01.2274.V1.1 Asparagus officinalis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1556.6 1769 54.2
Aco022002 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1545.0 1796 55.7
ASH_gene3664 Apostasia shenzhenica HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1359.0 1829 49.7
PEQU_06129 Phalaenopsis equestris HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1335.5 1841 48.8
PH01000633G0070 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1295.0 1927 46.5
evm.TU.AsparagusV1_06.828.V1.1 Asparagus officinalis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1293.1 1768 49.3
OB01G30180 Oryza brachyantha HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1267.7 1792 49.2
CALSI_Maker00041609 Calamus simplicifolius HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1261.5 912 73.0
PH01004832G0100 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1255.7 1801 47.9
OsR498G0815305000.01 Oryza sativa ssp. indica HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1244.2 1632 47.9
TRITD3Bv1G121350 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1225.7 1780 47.4
TraesCS3B02G235600 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1223.4 1780 47.4
TraesCS3D02G211100 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1218.0 1784 47.1
LP037312 Lolium perenne HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1212.2 1793 45.9
TRITD3Av1G132070 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1198.3 1786 46.9
GSVIVG01028685001 Vitis vinifera HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1197.6 1562 48.3
TraesCS3A02G208200 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1194.9 1786 46.8
Seita.5G259200 Setaria italica HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1184.9 1787 46.2
Pgl_GLEAN_10014164 Cenchrus americanus HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1171.8 1830 45.0
Misin06G171000 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1153.7 1774 46.4
Bradi2g14375 Brachypodium distachyon HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1152.1 1774 46.2
Zm00008a014469 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1147.1 1781 45.1
Misin16G251200 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1138.3 1775 44.7
Potri.002G243400 Populus trichocarpa HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1127.5 1864 43.9
Spipo6G0019000 Spirodela polyrhiza HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1124.8 1544 46.4
LP009998 Lolium perenne HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1123.6 1785 44.5
Zm00008a014468 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1122.5 1788 44.1
OB05G35500 Oryza brachyantha HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1121.7 1782 45.2
Potri.014G189900 Populus trichocarpa HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1117.1 1860 43.8
Zm00007a00016337 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1114.4 1779 44.2
Zjn_sc00021.1.g01830.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1112.1 1803 43.8
Sobic.009G256300 Sorghum bicolor HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1102.8 1773 43.9
Sobic.003G196300 Sorghum bicolor HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1100.9 1778 44.9
Bradi2g41720 Brachypodium distachyon HOM04x5M002407 ORTHO04x5M002528 0.0e+00 1085.1 1506 46.5
PH01000391G0300 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 3.1e-309 1064.7 1770 43.7
TraesCS1A02G439500 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 3.4e-303 1044.6 1762 44.0
TRITD1Bv1G226860 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 5.6e-298 1027.3 1780 43.5
TraesCS1D02G448700 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 4.7e-297 1024.2 1781 44.2
Misin17G265800 Miscanthus sinensis HOM04x5M002407 ORTHO04x5M002528 6.2e-297 1023.8 1583 43.9
Seita.3G121600 Setaria italica HOM04x5M002407 ORTHO04x5M002528 6.2e-297 1023.8 1473 45.1
Sspon.03G0012710-2B Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 1.0e-296 1023.1 1743 44.4
Oropetium_20150105_19585 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 1.2e-295 1019.6 1805 41.7
TraesCS1B02G474800 Triticum aestivum HOM04x5M002407 ORTHO04x5M002528 2.9e-294 1015.0 1782 43.3
Pgl_GLEAN_10003768 Cenchrus americanus HOM04x5M002407 ORTHO04x5M002528 3.5e-284 981.5 1778 41.3
AT3G24880 Arabidopsis thaliana HOM04x5M002407 ORTHO04x5M002528 6.6e-283 977.2 1591 42.2
AT3G24870 Arabidopsis thaliana HOM04x5M002407 ORTHO04x5M002528 8.4e-278 960.3 1764 40.6
Solyc06g083420.1 Solanum lycopersicum HOM04x5M002407 ORTHO04x5M002528 1.2e-276 956.4 1586 41.7
Solyc09g060080.2 Solanum lycopersicum HOM04x5M002407 ORTHO04x5M002528 3.3e-266 921.8 1629 40.2
Zosma2g02260 Zostera marina HOM04x5M002407 ORTHO04x5M002528 1.3e-257 893.3 1814 37.8
Zm00001d044283 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 2.4e-256 889.0 1517 41.5
Zm00001d044281 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 4.1e-240 835.1 1646 39.7
TRITD1Av1G228790 Triticum turgidum HOM04x5M002407 ORTHO04x5M002528 3.0e-227 792.3 1203 44.8
Zosma44g00240 Zostera marina HOM04x5M002407 ORTHO04x5M002528 1.1e-216 757.3 1771 35.7
PH01000410G0660 Phyllostachys edulis HOM04x5M002407 ORTHO04x5M002528 9.7e-210 734.2 1009 46.0
Aco011807 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 1.0e-190 671.0 1442 36.1
Aco029545 Ananas comosus HOM04x5M002407 ORTHO04x5M002528 2.5e-189 666.4 1352 37.1
Zm00001d009750 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 9.8e-170 601.3 871 44.9
LOC_Os08g08000 Oryza sativa ssp. japonica HOM04x5M002407 ORTHO04x5M002528 1.7e-161 573.9 674 57.0
CALSI_Maker00029449 Calamus simplicifolius HOM04x5M002407 ORTHO04x5M002528 2.8e-156 556.6 371 79.2
Zm00007a00045663 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 5.4e-152 542.3 831 43.3
Oropetium_20150105_04068 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 4.9e-145 519.2 1018 39.0
OsR498G0511447400.01 Oryza sativa ssp. indica HOM04x5M002407 ORTHO04x5M002528 3.0e-126 456.8 776 40.5
Sspon.03G0012710-1A Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 1.6e-124 451.1 624 52.6
PAB00036669 Picea abies HOM04x5M002407 ORTHO04x5M002528 5.0e-113 412.9 1045 34.2
ATR0796G143 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 9.4e-112 408.7 410 56.8
Zm00007a00039067 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 1.0e-110 405.2 810 37.5
Mapoly0075s0051 Marchantia polymorpha HOM04x5M002407 ORTHO04x5M002528 1.6e-103 381.3 1671 28.8
Zm00001d009751 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 5.2e-94 349.7 808 35.4
Zm00007a00016339 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 1.5e-85 321.6 675 37.3
gene19536 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M002528 9.8e-85 318.9 1059 31.2
gene29448 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M002528 1.4e-83 315.1 1060 30.8
Zm00008a030915 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 1.8e-83 314.7 475 44.8
Pp3c26_13270 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 1.3e-73 282.0 1606 26.5
Pp3c26_13274 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 1.3e-73 282.0 1606 26.5
ATR0618G010 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 4.7e-71 273.5 790 32.3
ATR0796G038 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 2.5e-64 251.1 676 32.7
Pp3c26_13463 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 3.3e-64 250.8 1619 27.4
Pp3c26_13460 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 3.3e-64 250.8 1619 27.4
Zm00007a00016338 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 9.5e-64 249.2 285 50.5
Sspon.07G0000180-1A Saccharum spontaneum HOM04x5M002407 ORTHO04x5M002528 8.3e-60 236.1 318 49.1
Pp3c7_10800 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 2.4e-59 234.6 1048 28.1
Pp3c4_31630 Physcomitrium patens HOM04x5M002407 ORTHO04x5M002528 4.1e-59 233.8 1038 29.0
LOC_Os05g51550 Oryza sativa ssp. japonica HOM04x5M002407 ORTHO04x5M002528 1.4e-54 218.8 524 40.6
PAB00026248 Picea abies HOM04x5M002407 ORTHO04x5M002528 5.6e-48 196.8 138 71.0
Zjn_sc00036.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002407 ORTHO04x5M002528 1.6e-47 195.3 713 28.6
Zm00008a030916 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 2.0e-45 188.3 584 31.2
PAB00055384 Picea abies HOM04x5M002407 ORTHO04x5M002528 1.9e-40 171.8 293 42.0
ATR0796G299 Amborella trichopoda HOM04x5M002407 ORTHO04x5M002528 2.3e-33 148.3 273 43.2
Zm00008a030914 Zea mays PH207 HOM04x5M002407 ORTHO04x5M002528 8.1e-31 139.8 329 33.4
Zm00007a00045515 Zea mays B104 HOM04x5M002407 ORTHO04x5M002528 3.7e-23 114.4 273 42.9
gene37402 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M027836 6.2e-23 113.6 203 36.9
gene28281 Selaginella moellendorffii HOM04x5M002407 ORTHO04x5M027836 6.2e-23 113.6 203 36.9
Oropetium_20150105_04067 Oropetium thomaeum HOM04x5M002407 ORTHO04x5M002528 1.3e-20 105.9 77 63.6
Zm00001d044284 Zea mays B73 HOM04x5M002407 ORTHO04x5M002528 9.3e-19 99.8 273 40.3
PAB00012890 Picea abies HOM04x5M002407 ORTHO04x5M002528 6.9e-14 83.6 77 62.3
PAB00019957 Picea abies HOM04x5M002407 ORTHO04x5M002528 1.3e-12 79.3 148 37.8
Pp3c10_13800 Physcomitrium patens HOM04x5M000092 ORTHO04x5M004291 4.3e-08 64.3 129 33.3
gene19163 Selaginella moellendorffii HOM04x5M000092 ORTHO04x5M004291 1.6e-07 62.4 119 35.3
gene16531 Selaginella moellendorffii HOM04x5M000092 ORTHO04x5M004291 2.8e-07 61.6 185 28.6
Cre13.g605800 Chlamydomonas reinhardtii HOM04x5M002407 ORTHO04x5M002528 3.7e-07 61.2 83 37.3
PH01000672G0430 Phyllostachys edulis HOM04x5M000092 ORTHO04x5M004291 1.1e-06 59.7 160 32.5
Pgl_GLEAN_10019999 Cenchrus americanus HOM04x5M000092 ORTHO04x5M004291 3.1e-06 58.2 162 32.7
Seita.1G278400 Setaria italica HOM04x5M000092 ORTHO04x5M004291 6.9e-06 57.0 167 31.1
AT3G12810 Arabidopsis thaliana HOM04x5M000092 ORTHO04x5M004291 9.0e-06 56.6 82 37.8
PAB00058324 Picea abies HOM04x5M002407 ORTHO04x5M002528 9.0e-06 56.6 107 43.0

Amborella trichopoda (4 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (0 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (7 genes)
Picea abies (6 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (3 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (6 genes)
Zea mays PH207 (5 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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