Interactive Phylogenetics Module

Gene Id
gene850

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
gene850 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 5.0e-297 1022.3 509 100.0
gene852 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 7.2e-296 1018.5 509 99.6
gene7721 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.3e-294 1013.4 509 98.4
gene16703 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.3e-163 577.4 539 56.4
gene29954 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 4.3e-163 577.4 539 56.4
Pp3c23_670 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 7.8e-141 503.4 538 51.3
Pp3c24_9100 Physcomitrium patens HOM04x5M002239 ORTHO04x5M002625 1.1e-134 483.0 549 49.5
Mapoly0010s0086 Marchantia polymorpha HOM04x5M002239 ORTHO04x5M002625 7.9e-133 476.9 547 47.3
gene1317 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.4e-126 455.3 500 51.0
Solyc05g052920.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 2.1e-125 452.2 544 46.9
p5.00_sc00032_p0096 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 3.5e-125 451.4 552 48.4
TRITD5Av1G257300 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 1.8e-124 449.1 490 50.0
gene25554 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 2.3e-124 448.7 501 50.9
TraesCS4B02G392600 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 2.3e-124 448.7 490 50.0
TraesCSU02G034000 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 3.9e-124 448.0 490 50.0
Ma09_g03530 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 8.7e-124 446.8 540 47.2
TraesCS1A02G173700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 1.9e-123 445.7 500 49.2
TraesCS1B02G190700 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 2.5e-123 445.3 500 49.4
TRITD1Bv1G112470 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 2.5e-123 445.3 500 49.4
Aco016849 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 3.3e-123 444.9 531 46.7
TRITD1Av1G111900 Triticum turgidum HOM04x5M002239 ORTHO04x5M002625 3.3e-123 444.9 500 49.0
Ma01_g05040 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 4.3e-123 444.5 555 48.5
OB10G22100 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 9.6e-123 443.4 498 49.8
Sspon.01G0000640-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 9.6e-123 443.4 503 49.3
Sspon.01G0000640-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.3e-122 443.0 503 49.1
HORVU4Hr1G089590 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 2.8e-122 441.8 487 49.7
OB03G10890 Oryza brachyantha HOM04x5M002239 ORTHO04x5M002625 2.8e-122 441.8 494 49.0
Seita.9G200900 Setaria italica HOM04x5M002239 ORTHO04x5M002625 2.8e-122 441.8 501 48.5
LOC_Os03g02030 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 4.8e-122 441.0 500 48.8
Zosma162g00210 Zostera marina HOM04x5M002239 ORTHO04x5M002625 6.2e-122 440.7 486 49.4
GSVIVG01016464001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 8.1e-122 440.3 540 45.6
Sobic.001G535500 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 1.1e-121 439.9 499 49.5
ASH_gene15508 Apostasia shenzhenica HOM04x5M002239 ORTHO04x5M002625 1.8e-121 439.1 492 50.0
OsR498G0305106600.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 3.1e-121 438.3 500 48.6
TraesCS1D02G165100 Triticum aestivum HOM04x5M002239 ORTHO04x5M002625 3.1e-121 438.3 501 49.1
Bradi1g77850 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 4.0e-121 438.0 499 48.5
GSVIVG01033555001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 4.0e-121 438.0 557 47.0
Zm00008a036205 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 5.3e-121 437.6 527 47.8
AT3G10160 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 6.9e-121 437.2 553 46.1
Potri.008G060600 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 9.0e-121 436.8 540 46.1
Seita.9G571100 Setaria italica HOM04x5M002239 ORTHO04x5M002625 9.0e-121 436.8 497 49.5
Misin01G518000 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 1.5e-120 436.0 499 48.7
ATR0721G042 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 2.0e-120 435.6 515 48.5
p5.00_sc00099_p0002 Elaeis guineensis HOM04x5M002239 ORTHO04x5M002625 2.0e-120 435.6 497 49.1
Misin02G507900 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 2.6e-120 435.3 499 48.9
evm.TU.AsparagusV1_08.3611.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 3.4e-120 434.9 513 47.8
Potri.010G197800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 1.3e-119 433.0 539 45.5
Ma06_g35910 Musa acuminata HOM04x5M002239 ORTHO04x5M002625 1.4e-118 429.5 539 45.3
Spipo6G0074700 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 9.3e-118 426.8 485 49.7
ATR0559G016 Amborella trichopoda HOM04x5M002239 ORTHO04x5M002625 4.6e-117 424.5 560 43.8
Bradi3g30210 Brachypodium distachyon HOM04x5M002239 ORTHO04x5M002625 1.0e-116 423.3 516 46.7
Aco002379 Ananas comosus HOM04x5M002239 ORTHO04x5M002625 5.7e-115 417.5 565 43.4
CALSI_Maker00039217 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 5.7e-115 417.5 527 48.6
Oropetium_20150105_09415 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 5.7e-115 417.5 495 47.3
LP000959 Lolium perenne HOM04x5M002239 ORTHO04x5M002625 2.1e-114 415.6 474 47.7
Zosma129g00040 Zostera marina HOM04x5M002239 ORTHO04x5M002625 2.6e-112 408.7 523 45.1
Zm00008a004043 Zea mays PH207 HOM04x5M002239 ORTHO04x5M002625 5.0e-111 404.4 482 46.7
AT5G05980 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 2.5e-110 402.1 537 44.3
AT3G55630 Arabidopsis thaliana HOM04x5M002239 ORTHO04x5M002625 3.2e-110 401.7 511 45.4
Pgl_GLEAN_10021628 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 4.2e-110 401.4 506 44.9
PEQU_09314 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 5.5e-110 401.0 527 43.6
LOC_Os10g35940 Oryza sativa ssp. japonica HOM04x5M002239 ORTHO04x5M002625 3.0e-108 395.2 497 46.5
Sobic.001G201900 Sorghum bicolor HOM04x5M002239 ORTHO04x5M002625 1.1e-105 386.7 502 44.6
Sspon.01G0020910-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 5.3e-105 384.4 443 48.1
Spipo27G0015800 Spirodela polyrhiza HOM04x5M002239 ORTHO04x5M002625 7.7e-104 380.6 440 48.0
Sspon.01G0020910-4D Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 1.2e-101 373.2 483 44.7
Sspon.01G0020910-1A Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 2.7e-101 372.1 457 46.6
Potri.016G041800 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 2.0e-99 365.9 449 46.5
evm.TU.AsparagusV1_05.14.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 5.7e-99 364.4 403 51.4
Zm00001d048514 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 9.1e-97 357.1 554 41.9
Misin01G184500 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 2.0e-96 355.9 331 53.8
Potri.006G045400 Populus trichocarpa HOM04x5M002239 ORTHO04x5M002625 7.9e-93 344.0 324 54.0
CALSI_Maker00015974 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 3.0e-92 342.0 581 40.4
MCO10G081 Micromonas commoda HOM04x5M002239 ORTHO04x5M002625 7.4e-91 337.4 539 39.1
PEQU_08658 Phalaenopsis equestris HOM04x5M002239 ORTHO04x5M002625 4.8e-90 334.7 470 44.9
CALSI_Maker00013977 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 3.1e-89 332.0 594 37.0
Sspon.01G0000640-3C Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 4.1e-89 331.6 506 40.9
Zjn_sc00092.1.g01510.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002239 ORTHO04x5M002625 1.6e-80 303.1 237 61.2
Pgl_GLEAN_10037820 Cenchrus americanus HOM04x5M002239 ORTHO04x5M002625 1.9e-78 296.2 463 41.9
Misin02G171600 Miscanthus sinensis HOM04x5M002239 ORTHO04x5M002625 1.3e-74 283.5 502 36.5
OsR498G1019001800.01 Oryza sativa ssp. indica HOM04x5M002239 ORTHO04x5M002625 3.2e-70 268.9 202 61.4
HORVU1Hr1G045670 Hordeum vulgare HOM04x5M002239 ORTHO04x5M002625 2.1e-69 266.2 268 50.4
Solyc04g016550.2 Solanum lycopersicum HOM04x5M002239 ORTHO04x5M002625 3.6e-69 265.4 373 44.0
Sspon.01G0020910-2B Saccharum spontaneum HOM04x5M002239 ORTHO04x5M002625 6.1e-69 264.6 199 62.3
Zm00007a00051636 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 4.0e-68 261.9 361 44.3
PH01000017G2160 Phyllostachys edulis HOM04x5M002239 ORTHO04x5M002625 6.3e-66 254.6 392 40.8
Oropetium_20150105_21335 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 3.6e-53 212.2 330 42.1
PH01000012G0660 Phyllostachys edulis HOM04x5M002239 ORTHO04x5M002625 2.0e-51 206.5 383 36.0
Cre05.g239100 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 9.8e-51 204.1 485 31.3
Oropetium_20150105_21336 Oropetium thomaeum HOM04x5M002239 ORTHO04x5M002625 1.2e-43 180.6 139 59.7
Cre05.g239067 Chlamydomonas reinhardtii HOM04x5M002239 ORTHO04x5M002625 2.9e-42 176.0 256 40.6
Zm00007a00051220 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 8.6e-39 164.5 135 57.8
gene35885 Selaginella moellendorffii HOM04x5M002239 ORTHO04x5M002625 1.5e-35 153.7 92 75.0
Mapoly0084s0006 Marchantia polymorpha HOM04x5M004591 ORTHO04x5M005491 7.6e-35 151.4 333 33.0
Zm00001d032529 Zea mays B73 HOM04x5M002239 ORTHO04x5M002625 2.2e-34 149.8 124 55.6
Zm00007a00051487 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 8.4e-34 147.9 124 54.8
gene9611 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 1.1e-33 147.5 339 32.7
gene32722 Selaginella moellendorffii HOM04x5M004591 ORTHO04x5M005491 1.1e-33 147.5 339 32.2
PAB00011009 Picea abies HOM04x5M002239 ORTHO04x5M002625 6.0e-32 141.7 224 39.3
LOC_Os12g42870 Oryza sativa ssp. japonica HOM04x5M004591 ORTHO04x5M005491 1.7e-31 140.2 516 28.9
Pp3c1_19310 Physcomitrium patens HOM04x5M004591 ORTHO04x5M005491 1.7e-31 140.2 340 32.6
AT5G41480 Arabidopsis thaliana HOM04x5M004591 ORTHO04x5M005491 2.3e-31 139.8 336 31.0
Sobic.008G125100 Sorghum bicolor HOM04x5M004591 ORTHO04x5M005491 5.1e-31 138.7 336 33.0
Misin14G119200 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 6.6e-31 138.3 336 32.1
Potri.015G022400 Populus trichocarpa HOM04x5M004591 ORTHO04x5M005491 6.6e-31 138.3 340 33.2
Misin15G141500 Miscanthus sinensis HOM04x5M004591 ORTHO04x5M005491 8.6e-31 137.9 336 33.0
Zm00001d023817 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 1.1e-30 137.5 335 31.0
Zm00008a036741 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 1.1e-30 137.5 335 31.0
GSVIVG01028720001 Vitis vinifera HOM04x5M004591 ORTHO04x5M005491 1.5e-30 137.1 331 32.0
evm.TU.AsparagusV1_08.3610.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M002625 4.3e-30 135.6 290 36.2
Zjn_sc00088.1.g00680.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004591 ORTHO04x5M005491 4.3e-30 135.6 314 33.1
PAB00050340 Picea abies HOM04x5M002239 ORTHO04x5M002625 7.3e-30 134.8 200 40.5
Zm00008a012364 Zea mays PH207 HOM04x5M004591 ORTHO04x5M005491 1.6e-29 133.7 332 31.6
OB12G26130 Oryza brachyantha HOM04x5M004591 ORTHO04x5M005491 2.8e-29 132.9 514 29.2
Seita.2G382200 Setaria italica HOM04x5M004591 ORTHO04x5M005491 2.8e-29 132.9 329 30.7
TraesCS5B02G022900 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 2.8e-29 132.9 329 31.3
Bradi4g01215 Brachypodium distachyon HOM04x5M004591 ORTHO04x5M005491 3.6e-29 132.5 329 31.0
OsR498G1222137800.01 Oryza sativa ssp. indica HOM04x5M004591 ORTHO04x5M005491 4.7e-29 132.1 266 34.6
CALSI_Maker00046052 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 3.1e-28 129.4 360 31.1
TRITD5Bv1G008000 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 3.1e-28 129.4 325 31.7
Aco010714 Ananas comosus HOM04x5M004591 ORTHO04x5M005491 4.0e-28 129.0 205 38.0
Zm00007a00051700 Zea mays B104 HOM04x5M002239 ORTHO04x5M002625 4.0e-28 129.0 132 50.8
PEQU_13280 Phalaenopsis equestris HOM04x5M004591 ORTHO04x5M005491 1.2e-27 127.5 173 41.6
Ma10_g14640 Musa acuminata HOM04x5M004591 ORTHO04x5M005491 1.5e-27 127.1 173 41.0
Zosma222g00340 Zostera marina HOM04x5M004591 ORTHO04x5M005491 1.5e-27 127.1 332 31.3
Sspon.02G0043910-3D Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 2.0e-27 126.7 358 31.0
ATR0661G386 Amborella trichopoda HOM04x5M004591 ORTHO04x5M005491 7.6e-27 124.8 341 31.1
Sspon.02G0043910-2C Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 6.4e-26 121.7 173 40.5
Zm00007a00028909 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 8.4e-26 121.3 173 40.5
Spipo14G0021500 Spirodela polyrhiza HOM04x5M004591 ORTHO04x5M005491 1.9e-25 120.2 173 41.6
evm.TU.AsparagusV1_01.2651.V1.1 Asparagus officinalis HOM04x5M004591 ORTHO04x5M005491 7.1e-25 118.2 173 39.3
Zm00001d041625 Zea mays B73 HOM04x5M004591 ORTHO04x5M005491 9.3e-25 117.9 357 30.0
TRITD5Av1G009960 Triticum turgidum HOM04x5M004591 ORTHO04x5M005491 1.2e-24 117.5 286 32.2
TraesCS5D02G031500 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 2.1e-24 116.7 173 38.7
Solyc06g051900.2 Solanum lycopersicum HOM04x5M004591 ORTHO04x5M005491 2.7e-24 116.3 175 37.7
Pgl_GLEAN_10007040 Cenchrus americanus HOM04x5M004591 ORTHO04x5M005491 1.3e-23 114.0 303 30.7
TraesCS5A02G025100 Triticum aestivum HOM04x5M004591 ORTHO04x5M005491 5.1e-23 112.1 173 37.6
CALSI_Maker00045140 Calamus simplicifolius HOM04x5M002239 ORTHO04x5M002625 6.6e-23 111.7 142 46.5
Cre03.g176800 Chlamydomonas reinhardtii HOM04x5M004591 ORTHO04x5M005491 8.7e-23 111.3 353 28.3
HORVU5Hr1G006850 Hordeum vulgare HOM04x5M004591 ORTHO04x5M005491 9.9e-19 97.8 301 29.2
Oropetium_20150105_26144 Oropetium thomaeum HOM04x5M004591 ORTHO04x5M005491 1.9e-17 93.6 302 29.5
ASH_gene13367 Apostasia shenzhenica HOM04x5M004591 ORTHO04x5M005491 4.2e-17 92.4 316 31.3
CALSI_Maker00004256 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 1.2e-16 90.9 331 27.8
MCO16G056 Micromonas commoda HOM04x5M004591 ORTHO04x5M005491 6.0e-16 88.6 175 34.3
p5.00_sc00001_p0333 Elaeis guineensis HOM04x5M004591 ORTHO04x5M005491 1.1e-14 84.3 134 37.3
CALSI_Maker00048144 Calamus simplicifolius HOM04x5M004591 ORTHO04x5M005491 7.4e-14 81.6 107 43.0
Zm00007a00021750 Zea mays B104 HOM04x5M004591 ORTHO04x5M005491 3.6e-13 79.3 143 34.3
Sspon.02G0043910-1T Saccharum spontaneum HOM04x5M004591 ORTHO04x5M005491 8.1e-13 78.2 131 38.9
PAB00014268 Picea abies HOM04x5M002239 ORTHO04x5M002625 1.1e-12 77.8 44 75.0
GSVIVG01038496001 Vitis vinifera HOM04x5M002239 ORTHO04x5M002625 2.2e-10 70.1 58 55.2
evm.TU.AsparagusV1_05.13.V1.1 Asparagus officinalis HOM04x5M002239 ORTHO04x5M040654 5.5e-09 65.5 46 69.6
PAB00036996 Picea abies HOM04x5M004591 ORTHO04x5M005491 2.1e-08 63.5 42 64.3
Zm00007a00000670 Zea mays B104 HOM04x5M002239 ORTHO04x5M017154 4.3e-06 55.8 165 25.5

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (7 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (4 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (3 genes)
Picea abies (4 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (10 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (8 genes)
Triticum turgidum (5 genes)
Vitis vinifera (4 genes)
Zea mays B73 (4 genes)
Zea mays B104 (7 genes)
Zea mays PH207 (4 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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