Interactive Phylogenetics Module

Gene Id
evm.TU.AsparagusV1_07.3669.V1.1

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
evm.TU.AsparagusV1_07.3669.V1.1 Asparagus officinalis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1493.4 731 100.0
CALSI_Maker00005878 Calamus simplicifolius HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1347.0 736 87.6
p5.00_sc00006_p0154 Elaeis guineensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1340.5 735 87.5
Aco003438 Ananas comosus HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1313.9 734 86.1
Ma02_g07730 Musa acuminata HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1280.4 732 83.6
Spipo4G0085100 Spirodela polyrhiza HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1276.9 732 83.7
Sobic.002G112700 Sorghum bicolor HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1257.3 731 81.9
Misin04G109200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1256.9 731 81.8
Seita.2G110200 Setaria italica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1255.7 730 81.9
Misin03G098200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1253.8 731 81.8
TraesCS3A02G076400 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1252.3 736 81.2
HORVU3Hr1G013640 Hordeum vulgare HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1250.7 736 80.8
TraesCS3B02G090300 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1248.4 736 81.0
Zm00008a008470 Zea mays PH207 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1247.6 731 81.3
TraesCS3D02G076500 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1246.9 736 81.0
PEQU_08732 Phalaenopsis equestris HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1246.1 732 81.4
Bradi1g29020 Brachypodium distachyon HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1245.3 734 80.7
OsR498G0713585300.01 Oryza sativa ssp. indica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1241.5 734 81.2
Sspon.02G0020200-1A Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1240.7 728 81.9
OB07G13280 Oryza brachyantha HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1240.3 734 81.1
LOC_Os07g07260 Oryza sativa ssp. japonica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1240.3 734 81.1
Zosma8g00780 Zostera marina HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1231.1 695 83.6
LP027001 Lolium perenne HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1226.1 734 79.6
Potri.001G087400 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1216.4 729 78.9
Potri.003G143700 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1204.1 729 78.5
Solyc08g082830.2 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1198.0 730 78.1
GSVIVG01019608001 Vitis vinifera HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1198.0 730 78.4
Zm00001d005157 Zea mays B73 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1166.4 731 77.2
AT1G55090 Arabidopsis thaliana HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1160.6 729 75.9
Sspon.02G0020200-3C Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1153.7 720 78.1
ASH_gene8283 Apostasia shenzhenica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1150.2 659 83.0
ATR1098G082 Amborella trichopoda HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1149.8 702 77.6
TRITD3Av1G021090 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1142.1 736 76.0
TRITD3Bv1G024720 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1136.7 736 75.5
gene17841 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 7.0e-292 1005.7 730 66.0
Mapoly0035s0052 Marchantia polymorpha HOM04x5M005046 ORTHO04x5M006164 7.2e-289 995.7 735 66.3
gene29750 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 7.2e-289 995.7 730 65.5
MCO17G006 Micromonas commoda HOM04x5M005046 ORTHO04x5M006164 1.8e-268 927.9 690 63.6
Pp3c17_21910 Physcomitrium patens HOM04x5M005046 ORTHO04x5M006164 2.8e-264 914.1 668 65.6
gene12860 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 4.3e-257 890.2 691 62.7
gene4078 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 1.2e-256 888.6 691 62.5
Cre10.g435250 Chlamydomonas reinhardtii HOM04x5M005046 ORTHO04x5M006164 1.4e-236 822.0 783 53.9
Sspon.02G0020200-4D Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 2.5e-180 635.2 377 79.6
PH01002232G0290 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 8.2e-176 620.2 407 74.2
PH01002232G0310 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.1e-172 609.8 357 82.1
PAB00015820 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.5e-172 609.4 411 73.0
Oropetium_20150105_11453 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 2.3e-154 548.9 321 79.4
Oropetium_20150105_11454 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 7.5e-153 543.9 314 84.1
Zm00007a00049707 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 1.3e-136 490.0 328 75.0
Zm00007a00051183 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 6.2e-123 444.5 264 80.7
PH01000031G0760 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 6.4e-120 434.5 242 85.5
Sspon.02G0020200-2B Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 1.4e-98 363.6 199 87.9
Zjn_sc00077.1.g00130.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 1.3e-51 207.6 241 47.3
PH01000031G0750 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 1.4e-42 177.6 118 72.9
Pgl_GLEAN_10033649 Cenchrus americanus HOM04x5M005046 ORTHO04x5M006164 7.1e-26 122.1 66 80.3
evm.TU.AsparagusV1_05.1844.V1.1 Asparagus officinalis HOM04x5M001700 ORTHO04x5M004467 2.7e-25 120.2 66 83.3
Solyc06g071240.1 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 3.7e-19 99.8 127 48.8
PAB00013173 Picea abies HOM04x5M005046 ORTHO04x5M006164 8.3e-19 98.6 65 66.2
Zjn_sc00077.1.g00140.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 1.2e-14 84.7 72 62.5

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings