Interactive Phylogenetics Module

Gene Id
evm.TU.AsparagusV1_07.3477.V1.1

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
evm.TU.AsparagusV1_07.3477.V1.1 Asparagus officinalis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1771.5 960 100.0
p5.00_sc00079_p0034 Elaeis guineensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1397.1 840 89.6
CALSI_Maker00040564 Calamus simplicifolius HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1380.9 840 89.2
Aco018477 Ananas comosus HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1373.2 844 88.0
Ma09_g26670 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1372.5 840 89.0
ASH_gene16649 Apostasia shenzhenica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1347.8 844 86.3
Oropetium_20150105_13133 Oropetium thomaeum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1332.0 840 82.4
Ma06_g32990 Musa acuminata HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1327.0 841 85.9
Misin06G412700 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1326.2 841 84.8
Misin06G362600 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1314.7 842 85.0
Bradi2g58070 Brachypodium distachyon HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1314.3 838 82.1
OB01G49770 Oryza brachyantha HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1301.2 839 80.6
TraesCS3B02G422700 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1298.5 839 82.7
TraesCS3D02G383500 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1296.6 839 83.3
Sobic.003G394200 Sorghum bicolor HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1295.4 842 84.2
Seita.5G420100 Setaria italica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1293.9 842 84.4
TraesCS3A02G390900 Triticum aestivum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1291.9 839 82.4
TRITD3Av1G230670 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1291.9 839 82.4
HORVU3Hr1G088490 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1290.4 839 81.5
LP034954 Lolium perenne HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1287.7 838 79.8
GSVIVG01016094001 Vitis vinifera HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1278.5 838 83.1
Zosma30g00970 Zostera marina HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1275.0 839 82.2
Zm00008a013008 Zea mays PH207 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1268.8 851 82.3
Sspon.03G0000770-1A Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1267.7 842 82.7
Zm00001d042451 Zea mays B73 HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1265.4 861 81.3
HORVU3Hr1G088450 Hordeum vulgare HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1264.6 839 80.6
ATR1098G037 Amborella trichopoda HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1261.1 841 79.0
Solyc04g049490.2 Solanum lycopersicum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1253.0 838 78.2
Sspon.03G0000770-4D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1253.0 842 81.9
Potri.016G023000 Populus trichocarpa HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1251.9 838 78.0
OsR498G0102540800.01 Oryza sativa ssp. indica HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1250.3 822 81.9
TRITD3Bv1G217030 Triticum turgidum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1245.0 838 80.0
Sspon.03G0045090-1D Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1234.6 879 78.5
Spipo16G0007900 Spirodela polyrhiza HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1223.8 856 75.5
Pgl_GLEAN_10010470 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1190.6 862 76.8
AT1G50500 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1185.2 842 73.5
PH01000031G1260 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 0.0e+00 1136.7 867 73.7
Zm00007a00032775 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 4.1e-308 1060.1 716 81.0
Mapoly0030s0152 Marchantia polymorpha HOM04x5M004483 ORTHO04x5M005884 4.2e-297 1023.5 854 64.1
Sspon.03G0000770-3C Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 8.9e-287 989.2 648 83.2
gene23001 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 4.3e-281 970.3 852 63.0
gene24646 Selaginella moellendorffii HOM04x5M004483 ORTHO04x5M005884 4.3e-281 970.3 852 63.0
Pp3c8_8190 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 4.9e-277 956.8 844 60.3
Pp3c24_4920 Physcomitrium patens HOM04x5M004483 ORTHO04x5M005884 1.1e-271 939.1 843 59.2
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.1e-260 902.5 842 65.0
PH01000229G0300 Phyllostachys edulis HOM04x5M004483 ORTHO04x5M005884 2.0e-201 705.7 654 63.5
Zjn_sc00034.1.g03870.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 1.4e-199 699.5 838 53.6
PEQU_14398 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 7.8e-174 614.0 407 83.8
LOC_Os01g67880 Oryza sativa ssp. japonica HOM04x5M004483 ORTHO04x5M005884 2.5e-172 609.0 401 83.0
MCO12G450 Micromonas commoda HOM04x5M004483 ORTHO04x5M005884 1.4e-143 513.5 787 40.2
PEQU_01746 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M005884 1.2e-121 440.7 286 82.9
Cre06.g259600 Chlamydomonas reinhardtii HOM04x5M004483 ORTHO04x5M005884 7.4e-108 394.8 826 31.8
Zjn_sc00009.1.g03380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004483 ORTHO04x5M005884 2.0e-100 370.2 307 67.8
AT1G50970 Arabidopsis thaliana HOM04x5M004483 ORTHO04x5M005884 6.5e-96 355.1 814 34.4
Misin11G134900 Miscanthus sinensis HOM04x5M004483 ORTHO04x5M005884 1.5e-84 317.4 182 93.4
Zm00007a00040839 Zea mays B104 HOM04x5M004483 ORTHO04x5M005884 1.3e-51 208.0 117 95.7
PEQU_14397 Phalaenopsis equestris HOM04x5M004483 ORTHO04x5M021890 5.0e-48 196.1 137 78.8
PAB00008915 Picea abies HOM04x5M004483 ORTHO04x5M005884 2.3e-45 187.2 120 76.7
PAB00059840 Picea abies HOM04x5M004483 ORTHO04x5M005884 9.6e-31 138.7 148 71.6
PAB00038035 Picea abies HOM04x5M004483 ORTHO04x5M021890 1.9e-26 124.4 146 54.1
Pgl_GLEAN_10023950 Cenchrus americanus HOM04x5M004483 ORTHO04x5M005884 1.9e-15 87.8 48 95.8
Zm00001d045865 Zea mays B73 HOM04x5M004483 ORTHO04x5M021890 6.2e-14 82.8 116 44.8
evm.TU.AsparagusV1_04.1246.V1.1 Asparagus officinalis HOM04x5M005851 ORTHO04x5M007066 1.4e-10 71.6 37 94.6
evm.TU.AsparagusV1_01.70.V1.1 Asparagus officinalis HOM04x5M001647 ORTHO04x5M039403 3.2e-10 70.5 37 91.9

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings