Interactive Phylogenetics Module

Gene Id
evm.TU.AsparagusV1_01.217.V1.1

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
evm.TU.AsparagusV1_01.217.V1.1 Asparagus officinalis HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1315.4 673 100.0
p5.00_sc00020_p0166 Elaeis guineensis HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1156.4 676 87.6
PEQU_01216 Phalaenopsis equestris HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1125.5 673 84.7
GSVIVG01025336001 Vitis vinifera HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1123.2 671 83.8
Aco017116 Ananas comosus HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1121.7 717 82.0
Ma01_g00040 Musa acuminata HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1109.0 668 83.8
Potri.003G211000 Populus trichocarpa HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1100.1 672 81.7
ATR0605G091 Amborella trichopoda HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1078.5 674 81.9
OB09G12250 Oryza brachyantha HOM04x5M004993 ORTHO04x5M007440 0.0e+00 1075.1 644 83.5
Seita.2G163500 Setaria italica HOM04x5M004993 ORTHO04x5M007440 1.8e-312 1073.5 639 84.4
Solyc01g014490.2 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M007440 3.6e-311 1069.7 670 79.0
Spipo5G0015900 Spirodela polyrhiza HOM04x5M004993 ORTHO04x5M007440 2.0e-309 1063.9 677 80.1
Sobic.002G152900 Sorghum bicolor HOM04x5M004993 ORTHO04x5M007440 4.4e-309 1062.8 644 83.1
LOC_Os09g10770 Oryza sativa ssp. japonica HOM04x5M004993 ORTHO04x5M007440 5.8e-309 1062.4 639 83.1
Zosma418g00070 Zostera marina HOM04x5M004993 ORTHO04x5M007440 7.6e-309 1062.0 680 79.9
TraesCS5B02G171400 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 3.5e-306 1053.1 644 81.8
TRITD5Bv1G107070 Triticum turgidum HOM04x5M004993 ORTHO04x5M007440 3.5e-306 1053.1 644 81.8
TraesCS5D02G178400 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 1.0e-305 1051.6 644 81.8
TraesCS5A02G173900 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 1.7e-305 1050.8 640 82.2
AT3G20780 Arabidopsis thaliana HOM04x5M004993 ORTHO04x5M007440 1.5e-304 1047.7 664 79.4
Zm00008a027627 Zea mays PH207 HOM04x5M004993 ORTHO04x5M007440 9.6e-304 1045.0 648 82.1
TRITD5Av1G127580 Triticum turgidum HOM04x5M004993 ORTHO04x5M007440 6.8e-302 1038.9 640 81.7
HORVU5Hr1G053310 Hordeum vulgare HOM04x5M004993 ORTHO04x5M007440 3.4e-301 1036.6 668 78.7
LP024950 Lolium perenne HOM04x5M004993 ORTHO04x5M007440 9.9e-301 1035.0 639 81.4
CALSI_Maker00003273 Calamus simplicifolius HOM04x5M004993 ORTHO04x5M007440 1.6e-290 1001.1 674 77.4
MisinT396000 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 1.3e-289 998.0 615 82.1
Pp3c22_12720 Physcomitrium patens HOM04x5M004993 ORTHO04x5M007440 1.0e-276 955.3 658 72.9
gene10704 Selaginella moellendorffii HOM04x5M004993 ORTHO04x5M007440 4.1e-270 933.3 651 72.2
gene23251 Selaginella moellendorffii HOM04x5M004993 ORTHO04x5M007440 4.1e-270 933.3 651 72.2
Pgl_GLEAN_10009201 Cenchrus americanus HOM04x5M004993 ORTHO04x5M007440 3.5e-266 920.2 639 75.3
Mapoly0042s0060 Marchantia polymorpha HOM04x5M004993 ORTHO04x5M007440 3.5e-266 920.2 662 70.2
Misin04G142500 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 1.1e-264 915.2 560 83.2
Bradi4g27057 Brachypodium distachyon HOM04x5M004993 ORTHO04x5M007440 1.3e-260 901.7 644 72.2
Zm00001d019950 Zea mays B73 HOM04x5M004993 ORTHO04x5M007440 3.0e-249 864.0 673 69.7
Misin03G039400 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 1.7e-244 848.2 506 82.6
PH01004131G0010 Phyllostachys edulis HOM04x5M004993 ORTHO04x5M007440 3.5e-237 823.9 639 70.1
ASH_gene14561 Apostasia shenzhenica HOM04x5M004993 ORTHO04x5M007440 3.7e-215 750.7 434 86.4
Cre01.g019750 Chlamydomonas reinhardtii HOM04x5M004993 ORTHO04x5M007440 2.1e-197 691.8 686 53.5
OsR498G0916907100.01 Oryza sativa ssp. indica HOM04x5M004993 ORTHO04x5M007440 3.0e-180 634.8 394 80.2
Oropetium_20150105_25268 Oropetium thomaeum HOM04x5M004993 ORTHO04x5M007440 1.7e-175 619.0 650 56.5
MCO09G243 Micromonas commoda HOM04x5M004993 ORTHO04x5M007440 7.6e-168 593.6 677 50.4
Zjn_sc00035.1.g00590.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004993 ORTHO04x5M007440 2.0e-115 419.5 646 44.4
Zm00007a00052658 Zea mays B104 HOM04x5M004993 ORTHO04x5M007440 4.1e-97 358.6 214 86.4
PAB00008600 Picea abies HOM04x5M004993 ORTHO04x5M007440 1.1e-89 334.0 187 86.1
Zm00007a00012939 Zea mays B104 HOM04x5M004993 ORTHO04x5M007440 1.7e-71 273.5 215 67.0
Sspon.07G0009390-3C Saccharum spontaneum HOM04x5M000049 ORTHO04x5M000028 9.9e-67 257.7 445 40.7
Sspon.02G0023840-2B Saccharum spontaneum HOM04x5M004993 ORTHO04x5M007440 4.9e-66 255.4 426 41.3
CALSI_Maker00003260 Calamus simplicifolius HOM04x5M004993 ORTHO04x5M007440 9.7e-30 134.8 96 70.8
evm.TU.AsparagusV1_07.911.V1.1 Asparagus officinalis HOM04x5M004993 ORTHO04x5M023265 5.9e-27 125.6 86 79.1
PAB00064024 Picea abies HOM04x5M004993 ORTHO04x5M023265 1.6e-24 117.5 85 75.3
PAB00044103 Picea abies HOM04x5M004993 ORTHO04x5M007440 2.6e-19 100.1 54 90.7
PAB00059297 Picea abies HOM04x5M004993 ORTHO04x5M007440 6.5e-18 95.5 70 75.7
Solyc11g028310.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M007440 1.3e-13 81.3 64 71.9
evm.TU.AsparagusV1_10.660.V1.1 Asparagus officinalis HOM04x5M004993 ORTHO04x5M036904 4.8e-13 79.3 45 91.1
PAB00037766 Picea abies HOM04x5M004993 ORTHO04x5M007440 1.4e-12 77.8 94 57.4
Solyc11g028300.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M199638 5.3e-12 75.9 147 38.1
Solyc12g036030.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M007440 8.5e-10 68.6 105 44.8
Solyc11g028340.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M198180 3.6e-08 63.2 43 67.4
Solyc11g028350.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M203530 8.8e-07 58.5 40 67.5

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Picea abies (5 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (2 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (6 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings