Interactive Phylogenetics Module

Gene Id
Zm00008a037492

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 2.6e-230 800.4 430 100.0
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.4e-223 777.3 426 96.7
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 3.7e-200 700.3 455 83.3
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 6.5e-197 689.5 460 82.6
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-196 688.7 460 82.2
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 6.1e-195 682.9 455 82.0
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 2.2e-192 674.5 460 80.9
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 1.1e-188 662.1 455 79.3
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 4.4e-185 650.2 425 83.5
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 7.8e-166 586.3 418 76.1
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 2.1e-163 578.2 435 72.4
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 1.3e-149 532.3 460 66.3
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 1.7e-149 531.9 470 66.0
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 4.7e-139 497.3 458 64.4
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 8.9e-138 493.0 458 64.0
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 8.9e-138 493.0 458 64.0
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 3.4e-137 491.1 458 63.5
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 3.0e-117 424.9 406 62.1
Zm00001d024833 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 3.5e-110 401.4 213 99.5
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 1.9e-108 395.6 414 59.2
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.7e-88 329.3 457 45.7
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 3.5e-81 305.1 282 65.2
Sspon.07G0013220-3D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-79 300.1 212 79.2
Aco007293 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 3.8e-72 275.0 451 42.1
Solyc03g118390.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 8.8e-69 263.8 456 39.5
Ma02_g03510 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 8.3e-67 257.3 215 61.4
Ma09_g01020 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 1.1e-63 246.9 446 39.9
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 8.8e-61 237.3 318 43.1
GSVIVG01004935001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 8.8e-61 237.3 440 38.4
Zosma69g00810 Zostera marina HOM04x5M001523 ORTHO04x5M001589 1.2e-60 236.9 437 36.4
Seita.8G134100 Setaria italica HOM04x5M001523 ORTHO04x5M001589 7.5e-60 234.2 434 36.4
ATR0582G200 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 9.8e-60 233.8 234 54.7
p5.00_sc01766_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 1.7e-59 233.0 225 57.3
p5.00_sc00057_p0063 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 4.9e-59 231.5 225 56.4
ATR0706G100 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 1.1e-58 230.3 232 53.9
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 1.1e-58 230.3 455 36.7
Zosma27g00300 Zostera marina HOM04x5M001523 ORTHO04x5M001589 1.1e-58 230.3 228 54.4
Aco027227 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.8e-58 229.6 374 39.6
Potri.005G044600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 5.4e-58 228.0 223 55.2
OB11G21770 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 7.0e-58 227.6 432 35.9
LOC_Os11g31950 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 7.0e-58 227.6 425 36.5
Misin09G134700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 9.2e-58 227.3 440 36.1
Misin10G109400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.6e-57 226.5 431 36.7
Oropetium_20150105_21536 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 1.6e-57 226.5 442 36.2
gene4642 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 2.7e-57 225.7 236 52.1
LP038183 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 4.5e-57 224.9 380 40.3
Sobic.005G129400 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 5.9e-57 224.6 440 35.9
gene16812 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 5.9e-57 224.6 236 51.7
PEQU_07858 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 7.7e-57 224.2 223 52.5
PEQU_08641 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 2.9e-56 222.2 225 52.9
Potri.001G065800 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.9e-56 222.2 258 49.6
TraesCS4A02G192600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 2.9e-56 222.2 430 36.7
LP009590 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 3.8e-56 221.9 228 52.2
Ma04_g00060 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 3.8e-56 221.9 222 57.7
Zm00001d049273 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 3.8e-56 221.9 440 35.9
Bradi4g17917 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 5.0e-56 221.5 446 35.9
TraesCS4B02G122700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 6.6e-56 221.1 430 36.7
Zm00007a00011305 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 6.6e-56 221.1 434 36.2
Aco015077 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.1e-55 220.3 236 50.4
GSVIVG01008631001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.1e-55 220.3 254 51.6
TRITD4Av1G154160 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.9e-55 219.5 425 36.7
HORVU4Hr1G023390 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 2.5e-55 219.2 425 36.5
LOC_Os01g70320 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 3.3e-55 218.8 229 52.0
TRITD4Bv1G050480 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 4.3e-55 218.4 425 36.7
TraesCS4D02G120700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 9.5e-55 217.2 431 36.7
AT4G08630 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.2e-54 216.9 277 46.2
Bradi2g59510 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 1.2e-54 216.9 229 52.0
Pp3c22_21290 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 1.2e-54 216.9 227 51.5
Pp3c22_21255 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 1.2e-54 216.9 227 51.5
Aco006674 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 4.7e-54 214.9 259 47.5
OB01G51640 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 8.0e-54 214.2 236 50.4
Potri.015G104600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 8.0e-54 214.2 266 45.9
CALSI_Maker00048189 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 1.0e-53 213.8 227 54.2
Potri.012G105400 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.4e-53 213.4 223 50.7
Sobic.003G412300 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 1.8e-53 213.0 224 50.4
TraesCS3B02G476100 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 3.0e-53 212.2 232 51.3
HORVU3Hr1G096450 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 4.0e-53 211.8 230 50.9
Misin05G403900 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 4.0e-53 211.8 224 50.0
TraesCS3A02G442300 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 4.0e-53 211.8 235 50.2
TRITD3Av1G250250 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 4.0e-53 211.8 235 50.2
Pp3c19_9680 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 6.8e-53 211.1 228 50.0
TraesCS3D02G435000 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 6.8e-53 211.1 230 50.9
Misin06G371400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 8.9e-53 210.7 224 49.6
TRITD3Bv1G242080 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.2e-52 210.3 235 49.8
Seita.5G438400 Setaria italica HOM04x5M001523 ORTHO04x5M001589 2.6e-52 209.1 224 50.4
Spipo4G0061800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 5.7e-52 208.0 225 52.9
ASH_gene19761 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 9.8e-52 207.2 445 36.9
Sspon.06G0014630-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 9.8e-52 207.2 225 48.9
Oropetium_20150105_09846 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 1.3e-51 206.8 224 49.6
Sspon.06G0014630-3C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.7e-51 206.5 225 48.9
Potri.003G164100 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.9e-51 205.7 451 35.9
Sspon.03G0027700-2C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 8.3e-51 204.1 224 50.0
AT4G25070 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.1e-50 203.8 224 47.8
Sspon.06G0014630-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.8e-50 203.0 487 33.1
AT5G13260 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.2e-49 200.3 264 47.3
CALSI_Maker00037144 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 1.2e-49 200.3 303 41.3
Sspon.03G0027700-1P Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 3.5e-49 198.7 218 50.5
Mapoly0101s0059 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 7.8e-49 197.6 220 49.1
AT3G48860 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.3e-48 196.8 259 45.9
CALSI_Maker00018832 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 6.6e-48 194.5 509 33.2
Spipo7G0049800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 1.9e-47 193.0 229 48.9
Sspon.06G0014630-4D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.5e-47 192.6 423 35.0
AT5G23700 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.8e-46 189.1 259 47.5
GSVIVG01021962001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.9e-42 176.4 198 51.0
OsR498G0509736400.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 9.5e-39 164.1 114 73.7
Zosma5g01040 Zostera marina HOM04x5M001523 ORTHO04x5M001589 3.6e-38 162.2 217 41.5
PH01000002G3240 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 4.4e-36 155.2 218 43.1
CALSI_Maker00016663 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 7.5e-36 154.5 438 32.0
Zjn_sc00009.1.g01850.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 9.8e-36 154.1 220 42.3
p5.00_sc00211_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 2.4e-34 149.4 130 58.5
OsR498G1120235900.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 9.2e-34 147.5 319 34.2
Mapoly0013s0021 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 7.8e-33 144.4 214 37.9
Zm00007a00002495 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.5e-31 139.4 161 47.8
Zm00008a012853 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 2.5e-31 139.4 161 47.8
Pgl_GLEAN_10000952 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.2e-30 137.1 173 45.1
PAB00042674 Picea abies HOM04x5M001523 ORTHO04x5M001589 3.6e-30 135.6 232 41.4
Solyc10g037930.1 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 3.6e-30 135.6 129 56.6
PEQU_04259 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 7.8e-25 117.9 106 59.4
evm.TU.AsparagusV1_04.1549.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 3.9e-24 115.5 123 53.7
evm.TU.AsparagusV1_09.1475.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 5.1e-24 115.2 114 51.8
PH01000258G0390 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 3.6e-22 109.0 108 63.9
Zjn_sc00034.1.g02320.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.8e-21 106.7 189 37.0
ASH_gene8570 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 1.5e-20 103.6 97 55.7
Zjn_sc00186.1.g00130.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 2.9e-19 99.4 91 51.6
Zm00001d042262 Zea mays B73 HOM04x5M000360 ORTHO04x5M000256 6.4e-19 98.2 300 26.7
Pgl_GLEAN_10000785 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.2e-17 94.0 86 54.7
Solyc05g023770.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 3.9e-16 89.0 273 30.0
evm.TU.AsparagusV1_Unassigned.393.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.2e-12 77.4 60 60.0
p5.00_sc00211_p0002 Elaeis guineensis HOM04x5M001523 ORTHO04x5M016727 3.4e-12 75.9 122 47.5
Aco021763 Ananas comosus HOM04x5M001523 ORTHO04x5M009652 3.8e-11 72.4 56 57.1
ASH_gene8571 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M016727 1.1e-10 70.9 119 47.9
PAB00006093 Picea abies HOM04x5M001523 ORTHO04x5M001589 2.4e-10 69.7 61 50.8
Aco028088 Ananas comosus HOM04x5M000382 ORTHO04x5M000270 1.8e-08 63.5 60 51.7
MCO12G428 Micromonas commoda HOM04x5M001523 ORTHO04x5M001589 1.8e-08 63.5 385 24.4
PH01002160G0250 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.8e-08 63.5 66 45.5
Cre03.g161578 Chlamydomonas reinhardtii HOM04x5M001523 ORTHO04x5M001589 9.6e-07 57.8 244 22.5
CALSI_Maker00048187 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M016727 1.3e-06 57.4 92 43.5
PH01002160G0270 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.3e-06 57.4 104 38.5
PAB00048619 Picea abies HOM04x5M001523 ORTHO04x5M001589 2.8e-06 56.2 102 40.2

Amborella trichopoda (2 genes)
Ananas comosus (6 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (5 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (4 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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