Interactive Phylogenetics Module

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Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00008a033609 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 1.5e-155 551.6 295 100.0
Zm00001d038934 Zea mays B73 HOM04x5M012281 ORTHO04x5M022609 7.2e-70 266.9 143 100.0
Zm00007a00024930 Zea mays B104 HOM04x5M012281 ORTHO04x5M003442 5.7e-67 257.3 219 71.2
Zm00001d007505 Zea mays B73 HOM04x5M012281 ORTHO04x5M022609 1.4e-60 236.1 191 73.3
Zm00007a00038090 Zea mays B104 HOM04x5M012281 ORTHO04x5M022609 5.7e-59 230.7 111 100.0
Pgl_GLEAN_10008730 Cenchrus americanus HOM04x5M003062 ORTHO04x5M003442 1.5e-56 222.6 164 76.8
Seita.9G513800 Setaria italica HOM04x5M003062 ORTHO04x5M003442 2.6e-56 221.9 164 76.2
Zm00001d027962 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 2.6e-56 221.9 164 76.8
Zm00008a000563 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 2.6e-56 221.9 164 76.8
Sspon.01G0004720-1A Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 3.8e-55 218.0 164 75.6
Sspon.01G0004720-4D Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 3.8e-55 218.0 164 75.6
Sspon.01G0004720-1P Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 3.8e-55 218.0 164 75.6
Sobic.001G478300 Sorghum bicolor HOM04x5M003062 ORTHO04x5M003442 6.5e-55 217.2 164 75.0
Misin01G450900 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 1.1e-54 216.5 164 75.0
Misin01G450600 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 1.1e-54 216.5 167 73.7
Sspon.01G0004720-3C Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 1.4e-54 216.1 164 75.0
Seita.1G081800 Setaria italica HOM04x5M003062 ORTHO04x5M003442 1.9e-54 215.7 164 75.0
Sspon.01G0004720-2B Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 3.6e-53 211.5 126 88.1
Misin01G358200 Miscanthus sinensis HOM04x5M003062 ORTHO04x5M003442 4.7e-53 211.1 165 72.7
PH01000803G0280 Phyllostachys edulis HOM04x5M003062 ORTHO04x5M003442 6.1e-53 210.7 163 71.8
LOC_Os03g08770 Oryza sativa ssp. japonica HOM04x5M003062 ORTHO04x5M003442 7.9e-53 210.3 164 72.0
OsR498G0305351100.01 Oryza sativa ssp. indica HOM04x5M003062 ORTHO04x5M003442 7.9e-53 210.3 164 72.0
OB03G16420 Oryza brachyantha HOM04x5M003062 ORTHO04x5M003442 1.0e-52 209.9 164 72.0
Sspon.01G0004720-2P Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 1.4e-52 209.5 152 77.0
Sspon.01G0009260-2B Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 9.7e-51 203.4 162 71.6
OsR498G0306417600.01 Oryza sativa ssp. indica HOM04x5M003062 ORTHO04x5M003442 1.7e-50 202.6 164 68.3
Zm00001d048239 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 6.3e-50 200.7 160 71.2
Zm00007a00015625 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 6.3e-50 200.7 160 71.2
Zm00008a035970 Zea mays PH207 HOM04x5M003062 ORTHO04x5M003442 6.3e-50 200.7 160 71.2
OB0111G10030 Oryza brachyantha HOM04x5M003062 ORTHO04x5M003442 1.1e-49 199.9 164 69.5
Oropetium_20150105_00315 Oropetium thomaeum HOM04x5M003062 ORTHO04x5M003442 1.1e-49 199.9 164 69.5
Zm00007a00015141 Zea mays B104 HOM04x5M012281 ORTHO04x5M031107 1.1e-49 199.9 169 64.5
Zm00008a033635 Zea mays PH207 HOM04x5M012281 ORTHO04x5M031107 1.1e-49 199.9 169 64.5
Zjn_sc00003.1.g10180.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 1.4e-49 199.5 162 69.1
Bradi1g72120 Brachypodium distachyon HOM04x5M003062 ORTHO04x5M003442 3.1e-49 198.4 164 67.1
TraesCS4A02G002400 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 7.0e-49 197.2 164 66.5
HORVU4Hr1G077970 Hordeum vulgare HOM04x5M003062 ORTHO04x5M003442 9.1e-49 196.8 164 65.9
LOC_Os03g37580 Oryza sativa ssp. japonica HOM04x5M003062 ORTHO04x5M003442 1.6e-48 196.1 152 69.7
TRITD4Av1G001030 Triticum turgidum HOM04x5M003062 ORTHO04x5M003442 2.0e-48 195.7 164 65.9
TraesCS4D02G301200 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 3.5e-48 194.9 164 65.2
TraesCS4B02G302700 Triticum aestivum HOM04x5M003062 ORTHO04x5M003442 3.5e-48 194.9 162 65.4
TRITD4Bv1G175000 Triticum turgidum HOM04x5M003062 ORTHO04x5M003442 3.5e-48 194.9 162 65.4
LP029391 Lolium perenne HOM04x5M003062 ORTHO04x5M003442 1.0e-47 193.4 164 67.1
HORVU4Hr1G056200 Hordeum vulgare HOM04x5M003062 ORTHO04x5M003442 1.3e-47 193.0 164 64.6
Sspon.01G0009260-3D Saccharum spontaneum HOM04x5M003062 ORTHO04x5M003442 7.2e-46 187.2 152 69.7
Zm00007a00023822 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 1.0e-44 183.3 125 80.8
Aco004029 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 1.2e-40 169.9 162 56.8
p5.00_sc00134_p0086 Elaeis guineensis HOM04x5M003062 ORTHO04x5M003442 1.6e-40 169.5 132 62.9
Aco002062 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 8.5e-39 163.7 162 53.7
PEQU_04760 Phalaenopsis equestris HOM04x5M003062 ORTHO04x5M003442 7.2e-38 160.6 161 54.7
Zm00007a00014453 Zea mays B104 HOM04x5M012281 ORTHO04x5M251481 7.2e-38 160.6 78 98.7
CALSI_Maker00016696 Calamus simplicifolius HOM04x5M003062 ORTHO04x5M003442 9.4e-38 160.2 164 53.7
Ma01_g08730 Musa acuminata HOM04x5M003062 ORTHO04x5M003442 1.7e-34 149.4 161 51.6
Ma04_g11640 Musa acuminata HOM04x5M003062 ORTHO04x5M003442 2.2e-34 149.1 178 46.1
CALSI_Maker00011001 Calamus simplicifolius HOM04x5M003062 ORTHO04x5M003442 2.8e-34 148.7 161 50.9
evm.TU.AsparagusV1_08.698.V1.1 Asparagus officinalis HOM04x5M003062 ORTHO04x5M003442 8.3e-34 147.1 162 50.6
p5.00_sc00033_p0156 Elaeis guineensis HOM04x5M003062 ORTHO04x5M003442 9.1e-33 143.7 162 50.6
AT3G53120 Arabidopsis thaliana HOM04x5M003062 ORTHO04x5M003442 4.5e-32 141.4 161 49.1
Potri.006G119200 Populus trichocarpa HOM04x5M003062 ORTHO04x5M003442 1.3e-31 139.8 162 48.1
Potri.016G097000 Populus trichocarpa HOM04x5M003062 ORTHO04x5M003442 2.2e-31 139.0 162 46.9
AT2G36680 Arabidopsis thaliana HOM04x5M003062 ORTHO04x5M003442 3.8e-31 138.3 161 47.2
evm.TU.AsparagusV1_Unassigned.949.V1.1 Asparagus officinalis HOM04x5M003062 ORTHO04x5M003442 1.9e-30 136.0 162 48.1
GSVIVG01033713001 Vitis vinifera HOM04x5M003062 ORTHO04x5M003442 1.9e-30 136.0 161 47.2
Zm00007a00032153 Zea mays B104 HOM04x5M012281 ORTHO04x5M250424 1.2e-29 133.3 66 95.5
Zjn_sc00002.1.g12320.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 3.6e-29 131.7 81 85.2
Zm00001d038935 Zea mays B73 HOM04x5M003062 ORTHO04x5M003442 3.6e-29 131.7 67 100.0
Spipo1G0029400 Spirodela polyrhiza HOM04x5M003062 ORTHO04x5M003442 6.1e-29 131.0 166 44.6
Zm00001d049043 Zea mays B73 HOM04x5M000476 ORTHO04x5M003260 5.2e-28 127.9 133 54.1
Zm00007a00027883 Zea mays B104 HOM04x5M000476 ORTHO04x5M003260 5.2e-28 127.9 133 54.1
Zm00008a015178 Zea mays PH207 HOM04x5M000476 ORTHO04x5M003260 5.2e-28 127.9 133 54.1
Zosma78g00270 Zostera marina HOM04x5M003062 ORTHO04x5M003442 2.0e-27 125.9 162 45.1
Solyc10g083780.1 Solanum lycopersicum HOM04x5M003062 ORTHO04x5M003442 4.4e-27 124.8 162 45.7
ATR1158G038 Amborella trichopoda HOM04x5M003062 ORTHO04x5M003442 1.8e-25 119.4 161 41.6
Solyc10g085810.1 Solanum lycopersicum HOM04x5M003062 ORTHO04x5M003442 7.0e-25 117.5 162 43.2
Aco027878 Ananas comosus HOM04x5M003062 ORTHO04x5M003442 1.3e-23 113.2 78 69.2
Pgl_GLEAN_10026818 Cenchrus americanus HOM04x5M003062 ORTHO04x5M003442 9.5e-22 107.1 70 81.4
Pp3c2_570 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 2.8e-21 105.5 162 39.5
PAB00013217 Picea abies HOM04x5M003062 ORTHO04x5M003442 1.2e-19 100.1 164 34.1
gene26822 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 1.5e-19 99.8 146 36.3
LOC_Os11g11020 Oryza sativa ssp. japonica HOM04x5M000476 ORTHO04x5M003260 4.4e-19 98.2 103 53.4
Mapoly0070s0080 Marchantia polymorpha HOM04x5M003062 ORTHO04x5M003442 9.8e-19 97.1 161 36.6
Pp3c14_24180 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 1.7e-18 96.3 151 36.4
gene15444 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 2.9e-18 95.5 145 35.9
gene9944 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 2.9e-18 95.5 148 35.1
Pgl_GLEAN_10018860 Cenchrus americanus HOM04x5M000476 ORTHO04x5M003260 3.7e-18 95.1 129 47.3
PH01000315G0410 Phyllostachys edulis HOM04x5M000476 ORTHO04x5M003260 4.9e-18 94.7 123 47.2
Pp3c1_40630 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 1.8e-17 92.8 154 36.4
PAB00030632 Picea abies HOM04x5M003062 ORTHO04x5M003442 2.4e-17 92.4 92 48.9
gene14254 Selaginella moellendorffii HOM04x5M003062 ORTHO04x5M003442 2.4e-17 92.4 165 32.1
OsR498G1119621400.01 Oryza sativa ssp. indica HOM04x5M000476 ORTHO04x5M003260 1.6e-16 89.7 121 44.6
PH01004986G0080 Phyllostachys edulis HOM04x5M000476 ORTHO04x5M003260 3.5e-16 88.6 125 44.8
Zjn_sc00002.1.g12310.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003062 ORTHO04x5M003442 7.8e-16 87.4 48 87.5
ATR0661G393 Amborella trichopoda HOM04x5M003062 ORTHO04x5M003442 1.3e-15 86.7 151 35.1
Seita.8G095000 Setaria italica HOM04x5M000476 ORTHO04x5M003260 2.3e-15 85.9 53 81.1
Sspon.08G0019540-1B Saccharum spontaneum HOM04x5M000372 ORTHO04x5M010053 1.9e-14 82.8 53 75.5
PAB00010919 Picea abies HOM04x5M003062 ORTHO04x5M003442 4.3e-14 81.6 92 45.7
Sspon.01G0009260-1A Saccharum spontaneum HOM04x5M003925 ORTHO04x5M005853 1.2e-13 80.1 50 80.0
Zjn_sc00207.1.g00090.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M000476 ORTHO04x5M003260 2.1e-13 79.3 130 40.8
MisinT522300 Miscanthus sinensis HOM04x5M000476 ORTHO04x5M003260 4.7e-13 78.2 134 39.6
HORVU4Hr1G016440 Hordeum vulgare HOM04x5M000476 ORTHO04x5M003260 6.2e-13 77.8 133 40.6
Bradi1g21840 Brachypodium distachyon HOM04x5M003062 ORTHO04x5M003442 1.3e-10 70.1 64 56.2
TraesCS4D02G104800 Triticum aestivum HOM04x5M000476 ORTHO04x5M003260 3.7e-10 68.6 123 40.7
TraesCS4A02G203900 Triticum aestivum HOM04x5M000476 ORTHO04x5M003260 1.4e-09 66.6 133 38.3
TRITD4Av1G157930 Triticum turgidum HOM04x5M000476 ORTHO04x5M003260 1.4e-09 66.6 133 38.3
TraesCS4B02G107700 Triticum aestivum HOM04x5M000476 ORTHO04x5M003260 1.9e-09 66.2 131 37.4
TRITD4Bv1G041130 Triticum turgidum HOM04x5M000476 ORTHO04x5M003260 1.9e-09 66.2 131 37.4
PAB00010920 Picea abies HOM04x5M003062 ORTHO04x5M003442 3.2e-09 65.5 84 41.7
Zm00007a00045891 Zea mays B104 HOM04x5M003062 ORTHO04x5M003442 9.2e-09 63.9 40 85.0
Zm00007a00015140 Zea mays B104 HOM04x5M017572 ORTHO04x5M031426 1.1e-06 57.0 44 70.5
Zm00008a033634 Zea mays PH207 HOM04x5M017572 ORTHO04x5M031426 3.3e-06 55.5 40 75.0
Misin10G081800 Miscanthus sinensis HOM04x5M000476 ORTHO04x5M003260 5.6e-06 54.7 23 100.0
OB11G15410 Oryza brachyantha HOM04x5M000476 ORTHO04x5M003260 5.6e-06 54.7 23 100.0
Pp3c17_23280 Physcomitrium patens HOM04x5M003062 ORTHO04x5M003442 5.6e-06 54.7 111 28.8
Sspon.05G0016210-1A Saccharum spontaneum HOM04x5M000476 ORTHO04x5M003260 5.6e-06 54.7 23 100.0
Sspon.05G0016210-3C Saccharum spontaneum HOM04x5M000476 ORTHO04x5M003260 5.6e-06 54.7 23 100.0
Sobic.005G100900 Sorghum bicolor HOM04x5M000476 ORTHO04x5M003260 7.3e-06 54.3 23 95.7

Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (3 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (4 genes)
Picea abies (4 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (12 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (3 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (1 genes)
Zea mays B73 (6 genes)
Zea mays B104 (10 genes)
Zea mays PH207 (6 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (4 genes)