Interactive Phylogenetics Module

Gene Id
Zm00008a022304

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d017199 Zea mays B73 HOM04x5M001954 ORTHO04x5M003798 2.6e-116 420.6 199 100.0
Zm00008a022304 Zea mays PH207 HOM04x5M001954 ORTHO04x5M003798 2.6e-116 420.6 199 100.0
Zm00007a00014778 Zea mays B104 HOM04x5M001954 ORTHO04x5M003798 1.7e-115 417.9 199 99.5
Sobic.004G213100 Sorghum bicolor HOM04x5M001954 ORTHO04x5M003798 4.8e-110 399.8 202 94.1
Misin07G404400 Miscanthus sinensis HOM04x5M001954 ORTHO04x5M003798 6.2e-110 399.4 199 95.5
Misin08G198300 Miscanthus sinensis HOM04x5M001954 ORTHO04x5M003798 1.3e-107 391.7 199 94.5
Sspon.04G0008400-3D Saccharum spontaneum HOM04x5M001954 ORTHO04x5M003798 3.8e-107 390.2 199 93.0
Sspon.04G0008400-1A Saccharum spontaneum HOM04x5M001954 ORTHO04x5M003798 1.9e-106 387.9 199 93.0
Seita.1G231000 Setaria italica HOM04x5M001954 ORTHO04x5M003798 7.1e-106 386.0 191 94.8
Sspon.04G0008400-2C Saccharum spontaneum HOM04x5M001954 ORTHO04x5M003798 6.0e-105 382.9 207 89.9
Pgl_GLEAN_10025857 Cenchrus americanus HOM04x5M001954 ORTHO04x5M003798 1.3e-104 381.7 202 90.6
Zjn_sc00017.1.g00670.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001954 ORTHO04x5M003798 1.8e-104 381.3 199 89.9
TraesCS6B02G250000 Triticum aestivum HOM04x5M001954 ORTHO04x5M003798 1.9e-98 361.3 185 88.1
TraesCS6A02G231300 Triticum aestivum HOM04x5M001954 ORTHO04x5M003798 4.2e-98 360.1 185 87.6
LP007319 Lolium perenne HOM04x5M001954 ORTHO04x5M003798 5.5e-98 359.8 185 87.6
TraesCS6D02G203800 Triticum aestivum HOM04x5M001954 ORTHO04x5M003798 5.5e-98 359.8 185 87.6
Bradi3g48590 Brachypodium distachyon HOM04x5M001954 ORTHO04x5M003798 6.7e-96 352.8 199 82.4
Oropetium_20150105_02746 Oropetium thomaeum HOM04x5M001954 ORTHO04x5M003798 4.3e-95 350.1 195 84.6
PH01001164G0610 Phyllostachys edulis HOM04x5M001954 ORTHO04x5M003798 4.8e-94 346.7 176 89.8
LOC_Os02g39930 Oryza sativa ssp. japonica HOM04x5M001954 ORTHO04x5M003798 6.3e-94 346.3 200 82.0
OsR498G0204292600.01 Oryza sativa ssp. indica HOM04x5M001954 ORTHO04x5M003798 6.3e-94 346.3 200 82.0
Aco016911 Ananas comosus HOM04x5M001954 ORTHO04x5M003798 3.3e-87 323.9 190 81.1
OB02G31150 Oryza brachyantha HOM04x5M001954 ORTHO04x5M003798 1.7e-86 321.6 186 80.1
p5.00_sc00019_p0087 Elaeis guineensis HOM04x5M001954 ORTHO04x5M003798 1.1e-85 318.9 184 77.2
CALSI_Maker00042660 Calamus simplicifolius HOM04x5M001954 ORTHO04x5M003798 3.1e-85 317.4 184 76.1
Solyc12g010320.1 Solanum lycopersicum HOM04x5M001954 ORTHO04x5M003798 7.9e-81 302.8 182 73.6
Solyc07g005210.2 Solanum lycopersicum HOM04x5M001954 ORTHO04x5M003798 1.0e-80 302.4 184 73.9
ASH_gene5183 Apostasia shenzhenica HOM04x5M001954 ORTHO04x5M003798 2.3e-80 301.2 189 71.4
Potri.018G110800 Populus trichocarpa HOM04x5M001954 ORTHO04x5M003798 3.9e-80 300.4 184 73.4
Ma05_g19400 Musa acuminata HOM04x5M001954 ORTHO04x5M003798 8.8e-80 299.3 188 72.3
AT5G58070 Arabidopsis thaliana HOM04x5M001954 ORTHO04x5M003798 5.7e-79 296.6 184 72.8
Spipo28G0011000 Spirodela polyrhiza HOM04x5M001954 ORTHO04x5M003798 1.3e-78 295.4 184 71.7
PEQU_15776 Phalaenopsis equestris HOM04x5M001954 ORTHO04x5M003798 2.0e-76 288.1 199 67.8
PEQU_15778 Phalaenopsis equestris HOM04x5M001954 ORTHO04x5M003798 7.7e-76 286.2 199 67.8
evm.TU.AsparagusV1_08.768.V1.1 Asparagus officinalis HOM04x5M001954 ORTHO04x5M003798 1.3e-75 285.4 169 76.9
Bradi3g36970 Brachypodium distachyon HOM04x5M001954 ORTHO04x5M003798 5.5e-74 280.0 185 71.4
OB08G23570 Oryza brachyantha HOM04x5M001954 ORTHO04x5M002655 7.2e-74 279.6 181 72.4
Zjn_sc00132.1.g00630.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001954 ORTHO04x5M003798 2.7e-73 277.7 182 69.8
LP024088 Lolium perenne HOM04x5M001954 ORTHO04x5M003798 1.0e-72 275.8 183 72.1
Seita.6G162500 Setaria italica HOM04x5M001954 ORTHO04x5M003798 1.0e-72 275.8 182 70.3
Oropetium_20150105_02220 Oropetium thomaeum HOM04x5M001954 ORTHO04x5M003798 1.4e-72 275.4 182 68.1
LOC_Os08g34150 Oryza sativa ssp. japonica HOM04x5M001954 ORTHO04x5M003798 1.8e-72 275.0 182 72.0
OsR498G0816171100.01 Oryza sativa ssp. indica HOM04x5M001954 ORTHO04x5M003798 1.8e-72 275.0 182 72.0
PH01003483G0210 Phyllostachys edulis HOM04x5M001954 ORTHO04x5M003798 1.8e-72 275.0 181 70.2
Sobic.007G140200 Sorghum bicolor HOM04x5M001954 ORTHO04x5M003798 3.0e-72 274.2 184 69.6
Sspon.06G0005730-2B Saccharum spontaneum HOM04x5M001954 ORTHO04x5M003798 3.0e-72 274.2 183 70.5
HORVU6Hr1G079030 Hordeum vulgare HOM04x5M001954 ORTHO04x5M003798 1.1e-71 272.3 182 70.9
Sspon.06G0005730-1A Saccharum spontaneum HOM04x5M001954 ORTHO04x5M003798 1.5e-71 271.9 183 69.9
TraesCS6B02G354000 Triticum aestivum HOM04x5M001954 ORTHO04x5M003798 1.5e-71 271.9 182 69.2
Zm00001d032162 Zea mays B73 HOM04x5M001954 ORTHO04x5M003798 7.4e-71 269.6 182 68.1
Zm00007a00033023 Zea mays B104 HOM04x5M001954 ORTHO04x5M003798 7.4e-71 269.6 182 68.1
Zm00008a003736 Zea mays PH207 HOM04x5M001954 ORTHO04x5M003798 7.4e-71 269.6 182 68.1
Pgl_GLEAN_10034672 Cenchrus americanus HOM04x5M001954 ORTHO04x5M003798 1.3e-70 268.9 182 67.6
TraesCS6D02G303200 Triticum aestivum HOM04x5M001954 ORTHO04x5M003798 2.2e-70 268.1 182 69.2
Misin07G301300 Miscanthus sinensis HOM04x5M001954 ORTHO04x5M003798 2.8e-70 267.7 183 68.9
Misin13G117300 Miscanthus sinensis HOM04x5M001954 ORTHO04x5M003798 2.8e-70 267.7 193 65.3
ATR1153G026 Amborella trichopoda HOM04x5M001954 ORTHO04x5M003798 2.4e-69 264.6 185 65.9
TraesCS6A02G323400 Triticum aestivum HOM04x5M001954 ORTHO04x5M003798 3.1e-69 264.2 182 68.7
TRITD6Av1G195920 Triticum turgidum HOM04x5M001954 ORTHO04x5M003798 3.1e-69 264.2 182 68.7
PAB00042011 Picea abies HOM04x5M001954 ORTHO04x5M003798 1.3e-67 258.8 186 64.5
CALSI_Maker00024392 Calamus simplicifolius HOM04x5M001954 ORTHO04x5M003798 2.2e-67 258.1 197 61.9
Zosma14g01690 Zostera marina HOM04x5M001954 ORTHO04x5M003798 2.2e-67 258.1 184 64.7
Zosma136g00270 Zostera marina HOM04x5M001954 ORTHO04x5M003798 5.0e-67 256.9 194 63.9
Zosma136g00320 Zostera marina HOM04x5M001954 ORTHO04x5M003798 8.0e-65 249.6 194 62.9
HORVU6Hr1G056570 Hordeum vulgare HOM04x5M001954 ORTHO04x5M003798 1.0e-64 249.2 124 90.3
PH01001429G0080 Phyllostachys edulis HOM04x5M001954 ORTHO04x5M003798 1.0e-64 249.2 124 90.3
Sspon.06G0005730-4D Saccharum spontaneum HOM04x5M001954 ORTHO04x5M003798 6.7e-64 246.5 229 55.0
Sspon.06G0005730-3C Saccharum spontaneum HOM04x5M001954 ORTHO04x5M003798 4.8e-62 240.4 183 63.9
Pp3c18_22450 Physcomitrium patens HOM04x5M001954 ORTHO04x5M003798 1.6e-60 235.3 190 57.4
gene24919 Selaginella moellendorffii HOM04x5M001954 ORTHO04x5M003798 8.3e-54 213.0 185 50.8
p5.00_sc00004_p0140 Elaeis guineensis HOM04x5M001954 ORTHO04x5M003798 1.8e-53 211.8 152 67.8
Mapoly0161s0027 Marchantia polymorpha HOM04x5M001954 ORTHO04x5M003798 1.2e-52 209.1 188 54.3
gene33831 Selaginella moellendorffii HOM04x5M001954 ORTHO04x5M003798 5.9e-52 206.8 190 48.9
GSVIVG01003729001 Vitis vinifera HOM04x5M001954 ORTHO04x5M003798 1.0e-51 206.1 125 72.0
PEQU_39387 Phalaenopsis equestris HOM04x5M001954 ORTHO04x5M003798 8.6e-51 203.0 121 75.2
Zosma379g00090 Zostera marina HOM04x5M001954 ORTHO04x5M003798 1.2e-47 192.6 145 64.1
PAB00054499 Picea abies HOM04x5M001954 ORTHO04x5M003798 5.9e-44 180.3 124 66.1
Zjn_sc00037.1.g01680.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M001954 ORTHO04x5M003798 2.1e-20 102.1 66 77.3
ASH_gene4439 Apostasia shenzhenica HOM04x5M001954 ORTHO04x5M003798 1.5e-18 95.9 62 66.1
HORVU6Hr1G079020 Hordeum vulgare HOM04x5M001954 ORTHO04x5M003798 2.6e-15 85.1 57 71.9
ASH_gene4438 Apostasia shenzhenica HOM04x5M001954 ORTHO04x5M003798 3.9e-11 71.2 54 61.1
Spipo14G0051300 Spirodela polyrhiza HOM04x5M007131 ORTHO04x5M008984 2.9e-06 55.1 187 28.3
Seita.7G245800 Setaria italica HOM04x5M007131 ORTHO04x5M008984 8.4e-06 53.5 190 26.8

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (6 genes)
Triticum turgidum (1 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (4 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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