Interactive Phylogenetics Module

Gene Id
Zm00008a013007

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00008a013007 Zea mays PH207 HOM04x5M005382 ORTHO04x5M006527 1.3e-308 1060.8 538 100.0
Zm00001d042450 Zea mays B73 HOM04x5M005382 ORTHO04x5M006527 1.3e-287 991.1 555 92.8
Zm00007a00017129 Zea mays B104 HOM04x5M005382 ORTHO04x5M006527 1.3e-287 991.1 555 92.8
Sobic.003G394300 Sorghum bicolor HOM04x5M005382 ORTHO04x5M006527 1.1e-278 961.4 555 89.9
Misin06G362700 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 1.0e-276 954.9 558 89.2
Seita.5G420200 Setaria italica HOM04x5M005382 ORTHO04x5M006527 2.5e-254 880.6 558 83.2
Pgl_GLEAN_10010471 Cenchrus americanus HOM04x5M005382 ORTHO04x5M006527 1.6e-253 877.9 572 81.3
Sspon.03G0028620-2C Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 6.0e-240 832.8 795 61.4
Bradi2g58077 Brachypodium distachyon HOM04x5M005382 ORTHO04x5M006527 3.4e-227 790.4 551 75.5
PH01000229G0250 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 1.9e-225 784.6 608 70.2
LP034953 Lolium perenne HOM04x5M005382 ORTHO04x5M006527 2.1e-224 781.2 551 75.5
OB01G49790 Oryza brachyantha HOM04x5M005382 ORTHO04x5M006527 1.4e-209 731.9 511 75.7
OsR498G0102541400.01 Oryza sativa ssp. indica HOM04x5M005382 ORTHO04x5M006527 1.6e-208 728.4 512 74.8
TraesCS3A02G390800 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 4.6e-208 726.9 560 69.6
TraesCS3B02G422600 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 7.9e-208 726.1 559 69.2
TraesCS3D02G383400 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 2.3e-207 724.5 560 69.1
HORVU3Hr1G088460 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 3.0e-207 724.2 559 69.4
TRITD3Av1G230650 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 4.3e-206 720.3 577 67.2
HORVU3Hr1G088480 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 7.4e-206 719.5 560 69.3
Oropetium_20150105_13135 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 4.8e-205 716.8 438 84.5
Aco024203 Ananas comosus HOM04x5M005382 ORTHO04x5M006527 8.1e-205 716.1 551 66.2
Misin06G412600 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 1.2e-203 712.2 419 88.5
TRITD3Bv1G217010 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 1.7e-202 708.4 555 68.1
LOC_Os01g67920 Oryza sativa ssp. japonica HOM04x5M005382 ORTHO04x5M006527 3.0e-183 644.4 454 74.7
evm.TU.AsparagusV1_04.597.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 1.2e-176 622.5 555 58.0
PH01000031G1370 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 1.4e-175 619.0 560 63.9
Ma08_g08710 Musa acuminata HOM04x5M005382 ORTHO04x5M006527 3.0e-175 617.8 544 58.5
PEQU_32184 Phalaenopsis equestris HOM04x5M005382 ORTHO04x5M006527 4.1e-172 607.4 551 56.3
Solyc06g071850.2 Solanum lycopersicum HOM04x5M005382 ORTHO04x5M006527 7.7e-163 576.6 524 56.3
GSVIVG01007574001 Vitis vinifera HOM04x5M005382 ORTHO04x5M006527 1.0e-154 549.7 578 52.1
ATR0824G019 Amborella trichopoda HOM04x5M005382 ORTHO04x5M006527 7.2e-153 543.5 582 51.2
p5.00_sc00130_p0062 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 9.4e-153 543.1 573 53.1
CALSI_Maker00005234 Calamus simplicifolius HOM04x5M005382 ORTHO04x5M006527 1.0e-143 513.1 503 55.9
Zosma79g00200 Zostera marina HOM04x5M005382 ORTHO04x5M006527 4.9e-133 477.6 498 52.2
AT5G63200 Arabidopsis thaliana HOM04x5M005382 ORTHO04x5M006527 5.4e-132 474.2 529 50.1
Sspon.03G0028540-1B Saccharum spontaneum HOM04x5M000049 ORTHO04x5M006527 1.6e-131 472.6 288 86.5
Potri.012G092000 Populus trichocarpa HOM04x5M005382 ORTHO04x5M006527 4.7e-128 461.1 529 48.4
gene5094 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 8.9e-119 430.3 524 46.2
gene7444 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 8.9e-119 430.3 524 46.2
Mapoly0013s0178 Marchantia polymorpha HOM04x5M005382 ORTHO04x5M006527 8.3e-117 423.7 537 44.1
Spipo4G0035200 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 3.5e-107 391.7 317 60.9
ASH_gene1600 Apostasia shenzhenica HOM04x5M005382 ORTHO04x5M006527 4.9e-101 371.3 462 46.8
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.6e-83 313.2 156 98.7
Spipo4G0035300 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 1.0e-42 177.6 202 50.5
evm.TU.AsparagusV1_05.2410.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 8.8e-42 174.5 138 60.1
evm.TU.AsparagusV1_08.1960.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 2.2e-40 169.9 130 60.8
Zjn_sc00034.1.g03860.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005382 ORTHO04x5M006527 5.7e-33 145.2 84 89.3
evm.TU.AsparagusV1_08.2080.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 1.2e-27 127.5 98 58.2
PAB00026557 Picea abies HOM04x5M005382 ORTHO04x5M006527 2.1e-27 126.7 111 55.0
p5.00_sc00032_p0014 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 1.7e-24 117.1 82 72.0
Oropetium_20150105_13136 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 2.8e-24 116.3 69 84.1
PAB00064933 Picea abies HOM04x5M005382 ORTHO04x5M006527 4.5e-22 109.0 144 44.4
PAB00034029 Picea abies HOM04x5M005382 ORTHO04x5M006527 8.6e-21 104.8 89 56.2
p5.00_sc00032_p0015 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 9.5e-20 101.3 72 63.9
PAB00061745 Picea abies HOM04x5M005382 ORTHO04x5M006527 1.4e-18 97.4 85 55.3
Sspon.03G0028620-1B Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 3.7e-16 89.4 49 89.8

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (4 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings