Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Zm00008a011307	Zea mays PH207	HOM04x5M009765	ORTHO04x5M012430	1.7e-30	134.0	71	100.0
Zm00001d040126	Zea mays B73	HOM04x5M009765	ORTHO04x5M012430	7.1e-16	85.5	43	100.0
Zm00007a00002647	Zea mays B104	HOM04x5M009765	ORTHO04x5M012430	7.1e-16	85.5	43	100.0
Misin06G054000	Miscanthus sinensis	HOM04x5M009765	ORTHO04x5M012430	1.8e-11	70.9	43	88.4
Sobic.003G100900	Sorghum bicolor	HOM04x5M009765	ORTHO04x5M012430	1.8e-11	70.9	43	90.7
Misin05G099400	Miscanthus sinensis	HOM04x5M009765	ORTHO04x5M012430	4.0e-11	69.7	42	90.5
TraesCS3B02G009600	Triticum aestivum	HOM04x5M009765	ORTHO04x5M012430	7.1e-08	58.9	49	69.4
TraesCS3D02G006500	Triticum aestivum	HOM04x5M009765	ORTHO04x5M012430	2.1e-07	57.4	49	69.4
HORVU6Hr1G090770	Hordeum vulgare	HOM04x5M009765	ORTHO04x5M012430	1.3e-06	54.7	49	65.3
HORVU3Hr1G000720	Hordeum vulgare	HOM04x5M009765	ORTHO04x5M012430	3.0e-06	53.5	48	64.6

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment