Interactive Phylogenetics Module

Gene Id
Zm00008a010545

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00008a010545 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 3084.3 1630 100.0
Zm00007a00017366 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 3032.7 1702 93.6
Zm00007a00033969 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2784.6 1701 87.5
Sobic.002G008900 Sorghum bicolor HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2775.3 1730 86.5
Seita.2G002900 Setaria italica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2488.4 1730 79.4
Pgl_GLEAN_10010211 Cenchrus americanus HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2390.5 1752 76.1
OB07G10690 Oryza brachyantha HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2374.0 1719 76.1
Bradi1g59325 Brachypodium distachyon HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2372.8 1722 74.9
PH01000549G0690 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2342.0 1810 70.7
TraesCS2D02G263300 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2339.3 1726 74.6
TraesCS2A02G260400 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2338.9 1726 74.6
TRITD2Av1G146870 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2338.9 1726 74.6
TraesCS2B02G281600 Triticum aestivum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2327.7 1746 73.7
TRITD2Bv1G129320 Triticum turgidum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2326.6 1746 73.6
Zm00001d018657 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2324.7 1420 88.2
LP030466 Lolium perenne HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2313.9 1739 73.4
OsR498G0713385700.01 Oryza sativa ssp. indica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2303.9 1719 74.8
HORVU2Hr1G064000 Hordeum vulgare HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2256.1 1686 72.4
Zm00008a026675 Zea mays PH207 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2201.0 1424 84.6
Zjn_sc00162.1.g00390.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2101.2 1563 75.3
Sspon.01G0062950-1D Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2063.1 1365 83.4
Sspon.02G0043350-1B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 2051.9 1713 69.6
p5.00_sc00151_p0024 Elaeis guineensis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1829.7 1768 59.0
Ma05_g01420 Musa acuminata HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1774.6 1729 57.4
Aco017576 Ananas comosus HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1756.1 1725 58.2
evm.TU.AsparagusV1_03.2056.V1.1 Asparagus officinalis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1714.9 1718 56.9
Misin04G013100 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1713.7 1059 87.3
PH01001640G0300 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1609.7 1703 59.0
PH01001526G0360 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1604.0 1347 67.3
ASH_gene7576 Apostasia shenzhenica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1591.6 1716 52.4
Potri.017G092600 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1548.9 1723 52.2
GSVIVG01011514001 Vitis vinifera HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1519.6 1710 51.6
PEQU_02399 Phalaenopsis equestris HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1502.6 1513 54.4
Spipo2G0087800 Spirodela polyrhiza HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1496.9 1663 51.2
Zosma159g00220 Zostera marina HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1496.9 1725 50.9
Zm00001d007943 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1493.0 792 99.9
ATR0064G076 Amborella trichopoda HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1433.7 1462 54.0
AT5G15540 Arabidopsis thaliana HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1426.8 1739 47.9
Solyc03g059420.2 Solanum lycopersicum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1402.9 1578 51.2
LOC_Os07g01940 Oryza sativa ssp. japonica HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1372.1 1000 78.1
CALSI_Maker00013263 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1347.4 1267 58.6
Oropetium_20150105_22008 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1226.1 944 74.9
Mapoly0011s0050 Marchantia polymorpha HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1128.2 1452 45.7
Pp3c15_14600 Physcomitrium patens HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1106.3 1729 40.8
gene23322 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1099.7 1650 42.2
gene10784 Selaginella moellendorffii HOM04x5M003226 ORTHO04x5M004921 0.0e+00 1097.4 1650 42.4
Sspon.02G0018920-1A Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 1.4e-287 992.6 682 79.5
Sspon.02G0025880-2B Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 7.8e-259 897.1 591 80.9
Misin04G013000 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 8.7e-242 840.5 561 81.6
PAB00017226 Picea abies HOM04x5M003226 ORTHO04x5M004921 1.2e-222 776.9 820 53.0
PAB00016463 Picea abies HOM04x5M003226 ORTHO04x5M004921 1.0e-221 773.9 849 50.6
Misin09G095400 Miscanthus sinensis HOM04x5M003226 ORTHO04x5M004921 2.1e-171 606.7 378 83.3
PAB00065273 Picea abies HOM04x5M003226 ORTHO04x5M004921 2.8e-75 287.3 341 47.8
Sspon.02G0025880-1A Saccharum spontaneum HOM04x5M003226 ORTHO04x5M004921 9.1e-74 282.3 178 79.8
Potri.004G119100 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 2.7e-65 254.2 486 37.7
PH01001526G0340 Phyllostachys edulis HOM04x5M003226 ORTHO04x5M004921 3.1e-58 230.7 222 64.9
Zm00001d048114 Zea mays B73 HOM04x5M001316 ORTHO04x5M013885 1.9e-47 194.9 155 65.2
Cre06.g278269 Chlamydomonas reinhardtii HOM04x5M003226 ORTHO04x5M004921 1.4e-45 188.7 1364 21.8
Zm00001d037074 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 7.8e-41 172.9 105 88.6
Zm00008a035868 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 7.8e-41 172.9 112 75.0
Zm00007a00043263 Zea mays B104 HOM04x5M003226 ORTHO04x5M004921 4.3e-39 167.2 164 57.3
MCO01G540 Micromonas commoda HOM04x5M003226 ORTHO04x5M004921 5.6e-39 166.8 219 40.2
Zm00001d026188 Zea mays B73 HOM04x5M003226 ORTHO04x5M011996 1.6e-38 165.2 160 57.5
Oropetium_20150105_21970 Oropetium thomaeum HOM04x5M003226 ORTHO04x5M004921 2.6e-36 157.9 101 80.2
Zm00008a033869 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 3.4e-36 157.5 100 76.0
Zm00008a017002 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 3.4e-36 157.5 100 76.0
Zm00001d018970 Zea mays B73 HOM04x5M001316 ORTHO04x5M013885 9.8e-36 156.0 98 76.5
Zm00007a00001952 Zea mays B104 HOM04x5M001316 ORTHO04x5M013885 1.3e-27 129.0 95 67.4
Sspon.02G0025880-3C Saccharum spontaneum HOM04x5M003226 ORTHO04x5M014305 1.2e-25 122.5 60 95.0
Zm00008a025706 Zea mays PH207 HOM04x5M003226 ORTHO04x5M013885 2.5e-23 114.8 74 75.7
Zm00007a00006395 Zea mays B104 HOM04x5M001316 ORTHO04x5M013885 2.8e-22 111.3 95 64.2
Zm00001d046771 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 1.9e-18 98.6 66 83.3
CALSI_Maker00024933 Calamus simplicifolius HOM04x5M003226 ORTHO04x5M013885 2.1e-14 85.1 125 40.0
Potri.004G119300 Populus trichocarpa HOM04x5M003226 ORTHO04x5M004921 6.2e-14 83.6 83 53.0
Zm00001d049603 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 6.4e-11 73.6 51 66.7
HORVU2Hr1G033240 Hordeum vulgare HOM04x5M003226 ORTHO04x5M004921 1.1e-10 72.8 66 59.1
p5.00_sc00306_p0013 Elaeis guineensis HOM04x5M003226 ORTHO04x5M024371 3.2e-10 71.2 104 42.3
Aco008507 Ananas comosus HOM04x5M004897 ORTHO04x5M005756 4.2e-10 70.9 39 82.1
Zm00001d033293 Zea mays B73 HOM04x5M003226 ORTHO04x5M004921 7.1e-10 70.1 48 68.8
Zm00001d037077 Zea mays B73 HOM04x5M000142 ORTHO04x5M000108 1.3e-06 59.3 30 100.0
Zm00001d035106 Zea mays B73 HOM04x5M003226 ORTHO04x5M011996 1.6e-06 58.9 28 89.3

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (3 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (11 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (6 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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