Interactive Phylogenetics Module

Gene Id
Zm00008a005426

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00008a005426 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 3.4e-104 380.6 228 100.0
Zm00007a00016215 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 2.7e-101 370.9 225 98.7
Zm00001d034380 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 7.9e-101 369.4 222 99.5
Misin01G055600 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 5.3e-89 330.1 222 86.0
Misin02G040400 Miscanthus sinensis HOM04x5M007573 ORTHO04x5M009717 9.4e-86 319.3 222 86.9
Zm00007a00047457 Zea mays B104 HOM04x5M007573 ORTHO04x5M009717 1.4e-84 315.5 225 80.4
Zm00008a019244 Zea mays PH207 HOM04x5M007573 ORTHO04x5M009717 1.4e-84 315.5 225 80.4
Zm00001d013100 Zea mays B73 HOM04x5M007573 ORTHO04x5M009717 2.3e-84 314.7 222 81.1
Sspon.01G0029910-2D Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 3.3e-83 310.8 225 83.6
Sspon.01G0029910-1A Saccharum spontaneum HOM04x5M007573 ORTHO04x5M009717 2.2e-82 308.1 225 84.0
Sobic.001G063100 Sorghum bicolor HOM04x5M007573 ORTHO04x5M009717 1.1e-81 305.8 222 86.0
Seita.9G062200 Setaria italica HOM04x5M007573 ORTHO04x5M009717 4.2e-70 267.3 223 78.5
Pgl_GLEAN_10033819 Cenchrus americanus HOM04x5M007573 ORTHO04x5M009717 5.7e-67 256.9 223 78.0
PH01000458G0270 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 9.5e-62 239.6 225 64.9
Zjn_sc00014.1.g06900.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 1.6e-61 238.8 222 72.5
TraesCS5D02G435000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 1.8e-60 235.3 226 65.9
TraesCS5A02G427100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 3.0e-60 234.6 226 62.8
TraesCS5B02G429000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 3.0e-60 234.6 224 63.8
TRITD5Bv1G212160 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 3.0e-60 234.6 226 64.2
TRITD5Av1G215750 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 8.8e-60 233.0 226 62.4
HORVU5Hr1G103790 Hordeum vulgare HOM04x5M007573 ORTHO04x5M009717 8.3e-58 226.5 228 64.5
LOC_Os03g57530 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 2.4e-49 198.4 227 57.7
OsR498G0307179400.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 2.4e-49 198.4 227 57.7
LP029224 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 1.2e-43 179.5 228 52.6
Bradi1g06250 Brachypodium distachyon HOM04x5M007573 ORTHO04x5M009717 2.0e-43 178.7 224 60.3
Zjn_sc00013.1.g06640.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M007573 ORTHO04x5M009717 1.5e-35 152.5 187 53.5
OB03G43760 Oryza brachyantha HOM04x5M007573 ORTHO04x5M009717 1.2e-29 132.9 224 50.0
PH01249411G0010 Phyllostachys edulis HOM04x5M007573 ORTHO04x5M009717 4.6e-24 114.4 131 56.5
LP037141 Lolium perenne HOM04x5M007573 ORTHO04x5M009717 8.6e-23 110.2 225 39.6
OsR498G0713568600.01 Oryza sativa ssp. indica HOM04x5M007573 ORTHO04x5M009717 3.6e-21 104.8 223 41.7
TraesCS2A02G248000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 3.6e-21 104.8 233 38.6
TraesCS5D02G268100 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 6.2e-21 104.0 230 41.7
LOC_Os07g06810 Oryza sativa ssp. japonica HOM04x5M007573 ORTHO04x5M009717 8.1e-21 103.6 223 39.9
TraesCS5B02G259000 Triticum aestivum HOM04x5M007573 ORTHO04x5M009717 6.4e-18 94.0 222 41.0
Seita.8G028900 Setaria italica HOM04x5M007573 ORTHO04x5M009717 5.1e-15 84.3 224 40.6
TRITD2Av1G133040 Triticum turgidum HOM04x5M007573 ORTHO04x5M009717 1.3e-13 79.7 107 50.5
Zjn_sc00051.1.g01820.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002876 ORTHO04x5M003544 2.4e-12 75.5 175 36.0
GSVIVG01022511001 Vitis vinifera HOM04x5M001892 ORTHO04x5M002029 1.8e-07 59.3 87 42.5
PH01000510G0710 Phyllostachys edulis HOM04x5M000670 ORTHO04x5M000562 2.3e-07 58.9 48 66.7
CALSI_Maker00009579 Calamus simplicifolius HOM04x5M001892 ORTHO04x5M002029 5.1e-07 57.8 66 50.0
p5.00_sc02709_p0001 Elaeis guineensis HOM04x5M001892 ORTHO04x5M002029 5.1e-07 57.8 68 45.6
evm.TU.AsparagusV1_03.437.V1.1 Asparagus officinalis HOM04x5M001892 ORTHO04x5M002029 1.5e-06 56.2 68 42.6
Bradi1g56922 Brachypodium distachyon HOM04x5M007573 ORTHO04x5M009717 4.3e-06 54.7 78 53.8
Aco008758 Ananas comosus HOM04x5M001892 ORTHO04x5M002029 5.6e-06 54.3 84 44.0

Amborella trichopoda (0 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (0 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (0 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (0 genes)
Oropetium thomaeum (0 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (0 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (0 genes)
Picea abies (0 genes)
Populus trichocarpa (0 genes)
Saccharum spontaneum (2 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (2 genes)
Solanum lycopersicum (0 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (0 genes)
Triticum aestivum (6 genes)
Triticum turgidum (3 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (0 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

Program Settings