Interactive Phylogenetics Module

Gene Id
Zm00007a00052658

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00052658 Zea mays B104 HOM04x5M004993 ORTHO04x5M007440 4.3e-119 430.3 258 100.0
Zm00008a027627 Zea mays PH207 HOM04x5M004993 ORTHO04x5M007440 5.6e-119 429.9 257 100.0
Sobic.002G152900 Sorghum bicolor HOM04x5M004993 ORTHO04x5M007440 2.6e-108 394.4 209 95.7
Seita.2G163500 Setaria italica HOM04x5M004993 ORTHO04x5M007440 2.4e-106 387.9 204 95.6
OB09G12250 Oryza brachyantha HOM04x5M004993 ORTHO04x5M007440 3.2e-106 387.5 209 92.8
Pgl_GLEAN_10009201 Cenchrus americanus HOM04x5M004993 ORTHO04x5M007440 1.2e-105 385.6 203 95.6
TraesCS5B02G171400 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 2.7e-105 384.4 209 91.4
TRITD5Bv1G107070 Triticum turgidum HOM04x5M004993 ORTHO04x5M007440 2.7e-105 384.4 209 91.4
TraesCS5D02G178400 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 3.0e-104 380.9 209 90.9
HORVU5Hr1G053310 Hordeum vulgare HOM04x5M004993 ORTHO04x5M007440 6.6e-104 379.8 206 91.7
TraesCS5A02G173900 Triticum aestivum HOM04x5M004993 ORTHO04x5M007440 1.9e-103 378.3 205 91.7
TRITD5Av1G127580 Triticum turgidum HOM04x5M004993 ORTHO04x5M007440 1.9e-103 378.3 205 91.7
LOC_Os09g10770 Oryza sativa ssp. japonica HOM04x5M004993 ORTHO04x5M007440 4.3e-103 377.1 204 92.6
PH01004131G0010 Phyllostachys edulis HOM04x5M004993 ORTHO04x5M007440 2.8e-102 374.4 203 92.1
LP024950 Lolium perenne HOM04x5M004993 ORTHO04x5M007440 1.8e-101 371.7 204 91.2
Ma01_g00040 Musa acuminata HOM04x5M004993 ORTHO04x5M007440 1.7e-99 365.2 215 85.1
Misin04G142500 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 1.7e-99 365.2 264 80.3
evm.TU.AsparagusV1_01.217.V1.1 Asparagus officinalis HOM04x5M004993 ORTHO04x5M007440 6.4e-99 363.2 214 86.4
CALSI_Maker00003273 Calamus simplicifolius HOM04x5M004993 ORTHO04x5M007440 1.1e-98 362.5 214 86.0
p5.00_sc00020_p0166 Elaeis guineensis HOM04x5M004993 ORTHO04x5M007440 1.9e-98 361.7 214 85.5
GSVIVG01025336001 Vitis vinifera HOM04x5M004993 ORTHO04x5M007440 9.3e-98 359.4 210 86.2
Potri.003G211000 Populus trichocarpa HOM04x5M004993 ORTHO04x5M007440 1.1e-95 352.4 214 82.7
Aco017116 Ananas comosus HOM04x5M004993 ORTHO04x5M007440 1.5e-95 352.1 210 85.7
ATR0605G091 Amborella trichopoda HOM04x5M004993 ORTHO04x5M007440 5.6e-95 350.1 213 83.6
PEQU_01216 Phalaenopsis equestris HOM04x5M004993 ORTHO04x5M007440 1.3e-94 349.0 215 82.8
ASH_gene14561 Apostasia shenzhenica HOM04x5M004993 ORTHO04x5M007440 2.8e-94 347.8 213 82.2
Zosma418g00070 Zostera marina HOM04x5M004993 ORTHO04x5M007440 6.2e-94 346.7 214 82.2
Zm00001d019950 Zea mays B73 HOM04x5M004993 ORTHO04x5M007440 1.2e-92 342.4 249 89.2
Solyc01g014490.2 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M007440 1.5e-92 342.0 213 80.8
AT3G20780 Arabidopsis thaliana HOM04x5M004993 ORTHO04x5M007440 4.5e-92 340.5 213 81.7
Pp3c22_12720 Physcomitrium patens HOM04x5M004993 ORTHO04x5M007440 2.9e-91 337.8 211 80.1
gene10704 Selaginella moellendorffii HOM04x5M004993 ORTHO04x5M007440 2.9e-91 337.8 209 82.3
gene23251 Selaginella moellendorffii HOM04x5M004993 ORTHO04x5M007440 2.9e-91 337.8 209 82.3
Spipo5G0015900 Spirodela polyrhiza HOM04x5M004993 ORTHO04x5M007440 2.9e-91 337.8 214 79.4
MisinT396000 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 5.4e-90 333.6 180 94.4
Mapoly0042s0060 Marchantia polymorpha HOM04x5M004993 ORTHO04x5M007440 6.4e-83 310.1 213 74.2
Oropetium_20150105_25268 Oropetium thomaeum HOM04x5M004993 ORTHO04x5M007440 5.5e-74 280.4 205 74.1
Sspon.02G0023840-2B Saccharum spontaneum HOM04x5M004993 ORTHO04x5M007440 8.7e-72 273.1 211 83.9
Sspon.07G0009390-3C Saccharum spontaneum HOM04x5M000049 ORTHO04x5M000028 8.7e-72 273.1 211 83.9
Cre01.g019750 Chlamydomonas reinhardtii HOM04x5M004993 ORTHO04x5M007440 1.7e-67 258.8 226 62.8
Zjn_sc00035.1.g00590.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004993 ORTHO04x5M007440 1.9e-63 245.4 176 77.3
Bradi4g27057 Brachypodium distachyon HOM04x5M004993 ORTHO04x5M007440 1.1e-61 239.6 209 63.2
MCO09G243 Micromonas commoda HOM04x5M004993 ORTHO04x5M007440 4.5e-52 207.6 209 53.1
Misin03G039400 Miscanthus sinensis HOM04x5M004993 ORTHO04x5M007440 7.7e-36 153.7 72 100.0
PAB00064024 Picea abies HOM04x5M004993 ORTHO04x5M023265 3.8e-19 98.2 58 81.0
evm.TU.AsparagusV1_07.911.V1.1 Asparagus officinalis HOM04x5M004993 ORTHO04x5M023265 6.1e-17 90.9 58 79.3
PAB00059297 Picea abies HOM04x5M004993 ORTHO04x5M007440 8.0e-17 90.5 70 71.4
Solyc11g028310.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M007440 1.2e-12 76.6 63 65.1
PAB00037766 Picea abies HOM04x5M004993 ORTHO04x5M007440 2.7e-12 75.5 86 57.0
Solyc12g036030.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M007440 3.0e-11 72.0 104 46.2
Solyc11g028300.1 Solanum lycopersicum HOM04x5M004993 ORTHO04x5M199638 2.2e-06 55.8 37 75.7

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (0 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (2 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings