Interactive Phylogenetics Module

Gene Id
Zm00007a00034356

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 0.0e+00 2021.9 1021 100.0
Zm00001d002390 Zea mays B73 HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1902.5 1143 87.1
Zm00008a006350 Zea mays PH207 HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1784.2 1190 80.1
Sobic.006G207300 Sorghum bicolor HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1764.6 1220 77.2
Seita.7G229000 Setaria italica HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1593.2 1256 69.4
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1575.5 1179 72.4
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1461.4 1244 65.4
OsR498G0409240600.01 Oryza sativa ssp. indica HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1393.3 1329 60.0
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1373.2 1244 61.6
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1362.4 1245 61.4
LP005256 Lolium perenne HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1346.3 1238 60.5
TRITD2Bv1G212650 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1342.8 1182 63.0
Zjn_sc00023.1.g02440.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1334.7 1165 64.3
Oropetium_20150105_01621 Oropetium thomaeum HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1300.4 1176 63.0
TRITD2Av1G250540 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1257.7 1245 57.8
TraesCS2B02G453300 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 0.0e+00 1142.5 1062 60.4
Aco006546 Ananas comosus HOM04x5M001072 ORTHO04x5M005443 7.0e-298 1026.2 1147 53.0
Ma01_g18780 Musa acuminata HOM04x5M004601 ORTHO04x5M005443 5.5e-295 1016.5 1212 49.0
PH01000224G0720 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 2.9e-288 994.2 645 80.0
p5.00_sc00005_p0252 Elaeis guineensis HOM04x5M004601 ORTHO04x5M005443 2.5e-279 964.5 1226 48.2
AT5G57160 Arabidopsis thaliana HOM04x5M004601 ORTHO04x5M005443 1.7e-267 925.2 1233 44.9
Zosma58g00340 Zostera marina HOM04x5M004601 ORTHO04x5M005443 2.3e-264 914.8 1237 46.2
Potri.018G141900 Populus trichocarpa HOM04x5M004601 ORTHO04x5M005443 1.1e-263 912.5 1318 43.2
GSVIVG01029314001 Vitis vinifera HOM04x5M004601 ORTHO04x5M005443 5.6e-263 910.2 1219 45.2
Spipo28G0023000 Spirodela polyrhiza HOM04x5M004601 ORTHO04x5M005443 8.0e-262 906.4 607 73.3
Sspon.05G0031190-2D Saccharum spontaneum HOM04x5M004601 ORTHO04x5M005443 7.3e-255 883.2 589 79.8
ATR0626G236 Amborella trichopoda HOM04x5M004601 ORTHO04x5M005443 2.8e-254 881.3 927 53.5
evm.TU.AsparagusV1_01.47.V1.1 Asparagus officinalis HOM04x5M004601 ORTHO04x5M005443 1.5e-252 875.5 912 53.7
PEQU_25681 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 3.9e-240 834.3 1072 45.9
Sspon.05G0031180-1P Saccharum spontaneum HOM04x5M004601 ORTHO04x5M005443 4.2e-234 814.3 722 64.1
Solyc07g017990.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 3.9e-216 754.6 549 69.0
Pp3c14_5920 Physcomitrium patens HOM04x5M004601 ORTHO04x5M005443 3.2e-210 734.9 1019 43.5
Misin12G212700 Miscanthus sinensis HOM04x5M004601 ORTHO04x5M005443 6.1e-209 730.7 433 88.9
OB04G31400 Oryza brachyantha HOM04x5M004601 ORTHO04x5M005443 9.4e-202 706.8 887 49.0
gene25806 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 4.8e-198 694.5 599 58.3
gene15054 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 8.2e-198 693.7 599 58.1
Mapoly0001s0137 Marchantia polymorpha HOM04x5M004601 ORTHO04x5M005443 3.1e-197 691.8 638 55.3
MisinT479200 Miscanthus sinensis HOM04x5M004601 ORTHO04x5M005443 4.8e-174 614.8 339 92.6
PH01000224G0730 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 2.0e-143 513.1 474 62.7
LOC_Os04g51700 Oryza sativa ssp. japonica HOM04x5M004601 ORTHO04x5M005443 1.7e-123 446.8 532 52.1
Sspon.05G0031190-1C Saccharum spontaneum HOM04x5M004601 ORTHO04x5M005443 3.6e-121 439.1 279 85.7
HORVU2Hr1G100740 Hordeum vulgare HOM04x5M004601 ORTHO04x5M005443 9.3e-117 424.5 472 54.9
ASH_gene14619 Apostasia shenzhenica HOM04x5M004601 ORTHO04x5M005443 1.3e-105 387.5 823 36.7
MisinT479300 Miscanthus sinensis HOM04x5M004601 ORTHO04x5M005443 5.9e-95 352.1 379 54.4
Sspon.05G0031180-1C Saccharum spontaneum HOM04x5M004601 ORTHO04x5M005443 3.1e-88 329.7 732 35.1
Cre10.g433550 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 5.3e-80 302.4 654 33.3
MisinT479400 Miscanthus sinensis HOM04x5M004601 ORTHO04x5M005443 4.5e-63 246.1 149 85.9
Sspon.05G0031180-2D Saccharum spontaneum HOM04x5M004601 ORTHO04x5M005443 1.2e-52 211.5 117 91.5
MCO08G104 Micromonas commoda HOM04x5M004601 ORTHO04x5M005443 2.8e-49 200.3 279 39.1
ASH_gene14617 Apostasia shenzhenica HOM04x5M004601 ORTHO04x5M005443 5.9e-47 192.6 142 71.1
HORVU2Hr1G100690 Hordeum vulgare HOM04x5M004601 ORTHO04x5M005443 5.0e-46 189.5 114 86.0
PEQU_14502 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 2.1e-44 184.1 142 69.7
PAB00016777 Picea abies HOM04x5M004601 ORTHO04x5M005443 1.7e-33 147.9 199 40.7
evm.TU.AsparagusV1_03.1209.V1.1 Asparagus officinalis HOM04x5M004601 ORTHO04x5M005443 2.7e-31 140.6 77 81.8
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 1.6e-28 131.3 507 24.1
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 3.1e-27 127.1 456 23.7
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 4.0e-27 126.7 569 24.4
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 4.0e-27 126.7 569 24.4
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 6.8e-27 125.9 416 26.0
Solyc07g018000.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 6.8e-27 125.9 454 29.7
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 1.5e-26 124.8 377 28.6
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.0e-26 124.4 594 25.1
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.0e-26 124.4 594 25.1
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.0e-26 124.4 594 25.1
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 2.6e-26 124.0 466 24.9
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 3.4e-26 123.6 391 28.9
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 9.8e-26 122.1 568 23.9
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 2.2e-25 120.9 594 24.7
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 2.2e-25 120.9 456 23.2
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 2.9e-25 120.6 591 23.7
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 3.7e-25 120.2 546 22.5
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 4.9e-25 119.8 600 24.0
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 4.9e-25 119.8 363 28.4
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 4.9e-25 119.8 456 23.0
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 8.3e-25 119.0 568 23.1
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 8.3e-25 119.0 456 23.0
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 1.4e-24 118.2 389 26.0
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.4e-24 118.2 379 26.9
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.9e-24 117.9 592 24.0
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.4e-24 117.5 456 22.8
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 2.4e-24 117.5 456 22.8
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 4.1e-24 116.7 456 22.6
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 4.1e-24 116.7 376 27.1
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 4.1e-24 116.7 379 26.6
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 5.4e-24 116.3 376 26.6
Cre06.g277801 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 5.4e-24 116.3 662 21.8
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 5.4e-24 116.3 529 24.0
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 9.2e-24 115.5 379 26.6
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.2e-23 115.2 379 26.6
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 1.2e-23 115.2 379 26.6
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.2e-23 115.2 379 26.6
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 1.6e-23 114.8 366 28.4
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 1.6e-23 114.8 439 24.4
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 2.1e-23 114.4 456 23.5
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 2.1e-23 114.4 362 27.3
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 2.7e-23 114.0 524 24.6
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 2.7e-23 114.0 362 27.3
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 4.6e-23 113.2 451 24.2
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 6.0e-23 112.8 524 24.4
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 7.8e-23 112.5 380 27.6
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 1.3e-22 111.7 456 23.0
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 1.7e-22 111.3 362 27.3
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 1.7e-22 111.3 362 27.3
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 6.6e-22 109.4 384 25.0
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.1e-21 108.6 384 25.0
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 1.5e-21 108.2 435 23.7
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 4.3e-21 106.7 566 23.1
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 5.6e-21 106.3 371 26.7
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 9.5e-21 105.5 523 22.8
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 9.5e-21 105.5 403 26.3
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 9.5e-21 105.5 317 27.1
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 9.5e-21 105.5 317 27.1
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 9.5e-21 105.5 317 27.1
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.2e-20 105.1 327 27.2
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 2.8e-20 104.0 419 25.1
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 3.6e-20 103.6 324 27.5
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 2.3e-19 100.9 538 22.3
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 3.1e-19 100.5 327 26.9
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 1.2e-18 98.6 435 24.4
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.5e-18 98.2 350 25.1
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 2.6e-18 97.4 365 25.2
HORVU1Hr1G031270 Hordeum vulgare HOM04x5M004601 ORTHO04x5M005443 2.6e-18 97.4 63 79.4
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 4.4e-18 96.7 357 26.3
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 6.4e-17 92.8 388 25.0
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 6.0e-15 86.3 274 27.4
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 1.0e-14 85.5 361 28.0
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 1.7e-14 84.7 446 22.2
Spipo28G0023100 Spirodela polyrhiza HOM04x5M004601 ORTHO04x5M005443 2.5e-13 80.9 87 47.1
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.1e-12 77.8 190 28.9
CALSI_Maker00038974 Calamus simplicifolius HOM04x5M004601 ORTHO04x5M005443 4.7e-12 76.6 334 29.9
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.0e-11 73.6 180 31.7
Zm00007a00030550 Zea mays B104 HOM04x5M000642 ORTHO04x5M000488 4.0e-11 73.6 81 50.6
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 1.2e-10 72.0 137 33.6
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 2.6e-10 70.9 199 26.6
Zm00007a00011312 Zea mays B104 HOM04x5M002853 ORTHO04x5M030983 3.4e-10 70.5 35 88.6
Zm00007a00016465 Zea mays B104 HOM04x5M000642 ORTHO04x5M000488 3.4e-10 70.5 35 88.6
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 7.6e-10 69.3 234 25.6
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 9.9e-10 68.9 135 32.6
Zm00007a00036663 Zea mays B104 HOM04x5M000642 ORTHO04x5M000488 1.3e-09 68.6 35 85.7
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 3.8e-09 67.0 200 30.0
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.4e-08 64.3 93 40.9
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 2.4e-08 64.3 130 31.5
PAB00013751 Picea abies HOM04x5M004601 ORTHO04x5M005443 4.2e-08 63.5 385 27.0
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.1e-07 61.2 93 38.7
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 8.7e-06 55.8 239 23.8

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (6 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (5 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (3 genes)
Miscanthus sinensis (7 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (4 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (3 genes)
Picea abies (3 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (11 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (4 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (2 genes)
Zea mays B73 (3 genes)
Zea mays B104 (7 genes)
Zea mays PH207 (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

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