Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 3.1e-123 443.7 215 100.0
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.3e-105 385.2 290 70.3
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 5.0e-105 383.3 290 70.0
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 1.6e-103 378.3 290 68.3
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 2.6e-101 370.9 290 67.2
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 1.9e-96 354.8 288 65.3
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 1.2e-95 352.1 290 64.1
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 6.1e-95 349.7 290 64.1
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 6.1e-95 349.7 290 64.1
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 8.0e-95 349.4 290 63.4
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 1.8e-94 348.2 290 63.8
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.0e-94 347.4 290 63.8
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 3.0e-94 347.4 290 63.8
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 8.8e-94 345.9 290 63.4
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 1.2e-93 345.5 290 62.4
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 2.0e-93 344.7 290 64.5
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 2.6e-93 344.4 289 64.7
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.4e-86 322.0 291 58.1
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 1.1e-83 312.4 291 57.4
Sspon.03G0031770-2C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 5.9e-82 306.6 221 73.3
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 3.8e-81 303.9 290 56.2
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 2.5e-80 301.2 290 59.7
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 6.8e-78 293.1 275 56.7
ASH_gene7517 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 1.8e-75 285.0 288 53.1
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 7.8e-74 279.6 291 52.6
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 3.9e-73 277.3 291 49.8
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 4.3e-72 273.9 291 51.9
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 8.9e-70 266.2 323 48.3
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.7e-65 251.9 299 50.8
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 3.4e-61 237.7 287 45.6
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 1.3e-60 235.7 290 43.8
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 7.8e-58 226.5 141 84.4
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 6.2e-55 216.9 166 66.3
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 8.4e-52 206.5 263 44.5
Zm00008a014123 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 8.1e-47 189.9 124 82.3
GSVIVG01031470001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 1.5e-45 185.7 278 36.0
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 1.3e-44 182.6 272 36.4
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 3.8e-44 181.0 277 35.0
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 8.4e-44 179.9 272 36.0
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 9.3e-43 176.4 277 34.7
AT1G08130 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 1.2e-42 176.0 276 34.8
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 1.0e-41 172.9 276 34.4
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 1.0e-41 172.9 276 34.4
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 1.0e-41 172.9 276 34.4
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.4
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.4
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.4
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.1
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.4
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.4
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.4
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.3e-41 172.6 276 34.4
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 1.7e-41 172.2 276 34.4
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.7e-41 172.2 276 34.4
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 3.0e-41 171.4 276 34.4
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 3.9e-41 171.0 276 34.4
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 3.9e-41 171.0 277 35.0
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.9e-41 171.0 276 34.4
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.9e-41 171.0 276 34.4
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 3.9e-41 171.0 276 34.4
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 3.9e-41 171.0 276 34.4
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 3.9e-41 171.0 276 34.4
ATR0329G039 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 5.1e-41 170.6 276 34.4
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 1.5e-40 169.1 272 34.2
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.5e-40 169.1 276 34.1
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 1.5e-40 169.1 276 34.1
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 1.5e-40 169.1 276 34.1
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.9e-40 168.7 276 34.1
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 4.3e-40 167.5 276 34.1
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 4.3e-40 167.5 276 33.7
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 7.3e-40 166.8 276 33.7
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 9.6e-40 166.4 271 34.3
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 2.8e-39 164.9 276 33.7
AT1G49250 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 3.6e-39 164.5 271 32.8
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 1.2e-37 159.5 271 32.5
Spipo19G0024800 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 2.0e-37 158.7 160 52.5
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 4.5e-37 157.5 246 34.1
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 4.5e-37 157.5 246 34.1
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 1.9e-35 152.1 258 38.8
Cre07.g325716 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 7.1e-35 150.2 274 32.5
Aco000044 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 5.6e-32 140.6 125 60.0
Oropetium_20150105_11084 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 1.1e-30 136.3 234 33.3
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 9.0e-30 133.3 240 32.5
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 4.5e-29 131.0 66 86.4
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 5.8e-29 130.6 66 86.4
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 1.7e-28 129.0 64 87.5
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 1.7e-28 129.0 242 32.2
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 2.9e-28 128.3 77 76.6
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 4.2e-27 124.4 66 84.8
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.6e-26 120.9 66 77.3
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 5.3e-22 107.5 174 32.8
p5.00_sc00008_p0159 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 5.8e-21 104.0 88 61.4
evm.TU.AsparagusV1_04.1989.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 6.5e-20 100.5 51 84.3
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 8.4e-20 100.1 63 66.7
Sspon.01G0019980-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 8.4e-20 100.1 160 35.0
ATR0749G104 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 3.1e-14 81.6 65 49.2
PAB00036263 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.0e-12 76.6 55 56.4
Zjn_sc00017.1.g06380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 1.9e-11 72.4 128 32.8
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 3.6e-10 68.2 234 25.6
gene15054 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 2.3e-09 65.5 255 25.9
gene25806 Selaginella moellendorffii HOM04x5M004601 ORTHO04x5M005443 1.1e-08 63.2 255 25.5
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 1.1e-06 56.6 251 23.1
Zm00008a006350 Zea mays PH207 HOM04x5M004601 ORTHO04x5M005443 1.4e-06 56.2 202 27.7
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 1.8e-06 55.8 260 22.3
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.4e-06 55.5 260 22.7
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.4e-06 55.5 260 22.7

Amborella trichopoda (3 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (3 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (2 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (8 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (2 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (8 genes)
Triticum turgidum (4 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (4 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)